| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ansA [H]
Identifier: 209695599
GI number: 209695599
Start: 2318948
End: 2319961
Strand: Direct
Name: ansA [H]
Synonym: VSAL_I2158
Alternate gene names: 209695599
Gene position: 2318948-2319961 (Clockwise)
Preceding gene: 209695598
Following gene: 209695601
Centisome position: 69.74
GC content: 41.12
Gene sequence:
>1014_bases ATGGAAAGAAAACACATTTATATCGCCTACACAGGCGGCACAATCGGCATGTTAAAATCTGATGATCATGGCTATGTCCC TGCATCAGGCTTTATGCAACATCAATTAAAGCAAATGCCAGAGTTTCACCGTGCTGAAATGCCAATTTTCACCATTCACG AATATGAGCCATTAATCGATTCATCTGACATGACTCCAGAAGACTGGCAGCGTATTGCAGATGATATTCGTGCTAACTAC GATAAATACGACGGATTTGTAATTCTTCATGGTACGGATACCATGGCCTACACAGCATCTGCACTTTCATTTATGCTAGA GAACCTCGGTAAACCAGTTATTGTTACCGGTTCACAGATCCCTCTTGCAGAACTTCGCTCTGATGGCCAAAGTAACTTAT TAAATGCACTGCACATTGCCGCAAATTATCCAATTAACGAAGTGACGTTATTTTTCAATAACAAACTTATTCGCGGTAAC CGCAGTACAAAATCTCATGCCGATGGCTTTAACGCATTCAGTTCACCAAATTTACCTCCATTATTGGAAGCTGGTATTAA TATCCAAATCAACGGTGTTGAAATTAATAAGCAACCTGAAGGTGAATTTACGGTTAACAACATTACACCACAGCCCATTG GTGTCGTTACCATGTATCCAGGCATCTCTGCGGAAGTGATTAAAAATACATTACGTCAACCTGTAAATGCAATGATATTA CTGACTTTTGGTGTTGGTAATGCTCCTCAAAATCCTGAGCTTTTGGCACAATTAAAAGAGGCTTCTGAGCGCGGCGTTGT CGTCATCAATTTAACTCAGTGCTTATCGGGAAAAGTAAACATGGGTGGCTATGCTACGGGTTGTGCTCTTGCTGAAGCTG GCGTGATCAGCGGCTACGATATGACACCAGAAGCAGCTCTTGCTAAATTACATTACTTATTAAGCAAAAACCTGCCTTAT GAAACCATGCGTACGATGATGCAGCAAAATCTACGTGGTGAGTTAACTTACTAA
Upstream 100 bases:
>100_bases ATCTGTAAAAGCATGACGAGCCCGACACATGTCGGGCTTTCTTTATGCAGAATGACCAGTATAATCCCACCACCTCCCAT AACTCTGTACCGTTGTTATT
Downstream 100 bases:
>100_bases CTACAGATGTCTTTAAATAATAAAAAGGCTTCCCTGATCACTCATGGGAAGCCTTTTTTAATTCTAAAAACCGAAATATA TATTATCTTTTTTCGTTAAG
Product: cytoplasmic asparaginase I
Products: NA
Alternate protein names: L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MERKHIYIAYTGGTIGMLKSDDHGYVPASGFMQHQLKQMPEFHRAEMPIFTIHEYEPLIDSSDMTPEDWQRIADDIRANY DKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGN RSTKSHADGFNAFSSPNLPPLLEAGINIQINGVEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL LTFGVGNAPQNPELLAQLKEASERGVVVINLTQCLSGKVNMGGYATGCALAEAGVISGYDMTPEAALAKLHYLLSKNLPY ETMRTMMQQNLRGELTY
Sequences:
>Translated_337_residues MERKHIYIAYTGGTIGMLKSDDHGYVPASGFMQHQLKQMPEFHRAEMPIFTIHEYEPLIDSSDMTPEDWQRIADDIRANY DKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGN RSTKSHADGFNAFSSPNLPPLLEAGINIQINGVEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL LTFGVGNAPQNPELLAQLKEASERGVVVINLTQCLSGKVNMGGYATGCALAEAGVISGYDMTPEAALAKLHYLLSKNLPY ETMRTMMQQNLRGELTY >Mature_337_residues MERKHIYIAYTGGTIGMLKSDDHGYVPASGFMQHQLKQMPEFHRAEMPIFTIHEYEPLIDSSDMTPEDWQRIADDIRANY DKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGN RSTKSHADGFNAFSSPNLPPLLEAGINIQINGVEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL LTFGVGNAPQNPELLAQLKEASERGVVVINLTQCLSGKVNMGGYATGCALAEAGVISGYDMTPEAALAKLHYLLSKNLPY ETMRTMMQQNLRGELTY
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=359, Percent_Identity=45.125348189415, Blast_Score=283, Evalue=2e-76, Organism=Escherichia coli, GI1788065, Length=336, Percent_Identity=74.7023809523809, Blast_Score=518, Evalue=1e-148, Organism=Escherichia coli, GI1789327, Length=286, Percent_Identity=25.5244755244755, Blast_Score=78, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17558280, Length=361, Percent_Identity=47.0914127423823, Blast_Score=313, Evalue=7e-86, Organism=Caenorhabditis elegans, GI193207372, Length=361, Percent_Identity=47.0914127423823, Blast_Score=313, Evalue=8e-86, Organism=Caenorhabditis elegans, GI17558278, Length=361, Percent_Identity=47.0914127423823, Blast_Score=313, Evalue=8e-86, Organism=Caenorhabditis elegans, GI193207374, Length=361, Percent_Identity=47.0914127423823, Blast_Score=313, Evalue=1e-85, Organism=Saccharomyces cerevisiae, GI6320527, Length=179, Percent_Identity=29.0502793296089, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI24639609, Length=364, Percent_Identity=43.6813186813187, Blast_Score=297, Evalue=8e-81, Organism=Drosophila melanogaster, GI24645530, Length=361, Percent_Identity=44.5983379501385, Blast_Score=291, Evalue=3e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006033 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 37110; Mature: 37110
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2 ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKHIYIAYTGGTIGMLKSDDHGYVPASGFMQHQLKQMPEFHRAEMPIFTIHEYEPLID CCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCC SSDMTPEDWQRIADDIRANYDKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQI CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCC PLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGNRSTKSHADGFNAFSSPNLPP CHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCH LLEAGINIQINGVEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL HHHCCCEEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEE LTFGVGNAPQNPELLAQLKEASERGVVVINLTQCLSGKVNMGGYATGCALAEAGVISGYD EEECCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEEHHHHHHHCCCCCCCC MTPEAALAKLHYLLSKNLPYETMRTMMQQNLRGELTY CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MERKHIYIAYTGGTIGMLKSDDHGYVPASGFMQHQLKQMPEFHRAEMPIFTIHEYEPLID CCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCC SSDMTPEDWQRIADDIRANYDKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQI CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCC PLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGNRSTKSHADGFNAFSSPNLPP CHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCH LLEAGINIQINGVEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL HHHCCCEEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEE LTFGVGNAPQNPELLAQLKEASERGVVVINLTQCLSGKVNMGGYATGCALAEAGVISGYD EEECCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEEHHHHHHHCCCCCCCC MTPEAALAKLHYLLSKNLPYETMRTMMQQNLRGELTY CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]