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The map label for this gene is tdk [H]

Identifier: 209695404

GI number: 209695404

Start: 2076233

End: 2076811

Strand: Direct

Name: tdk [H]

Synonym: VSAL_I1941

Alternate gene names: 209695404

Gene position: 2076233-2076811 (Clockwise)

Preceding gene: 209695403

Following gene: 209695405

Centisome position: 62.44

GC content: 37.65

Gene sequence:

>579_bases
GTGGCTCAAATGTACTTTTATTACTCAGCAATGAATGCGGGTAAATCAACAACACTTCTTCAATCGTCTTTTAATTACCA
AGAACGCGGAATGAATCCTGTGATTTTCACTGCGGCTATTGATGATCGTTACGGTGTAGGAAAAGTGAGCTCTCGTATTG
GTCTAGATGCCGATGCGCATTTATTTCATACAGACATGGATATGTTCGAAACGATTAAAACGCTGCATGAAGCAAAAAAA
ATACACTGTGTATTAATCGATGAATGCCAGTTTTTGACGAAAGAGCAAGTTTACCAATTAACAGAAGTCGTCGATAAATT
GCATATCCCAGCGTTATGTTATGGGTTACGTACTGACTTTTTAGGTGAGCTATTTGAAGGCAGTAAATATTTATTATCAT
GGGCTGATAAATTGGTTGAGTTAAAAACCATTTGTCATTGTGGTCGTAAAGCGAACATGGTTATTCGTACTGATGAGCAT
GGTGTTGCTATTGCTGATGGTGATCAAGTTGCTATTGGTGGTAATGAATTATATGTATCCGTTTGCCGAAGCCATTATAA
AGAAGCACTAGGTAAGTAA

Upstream 100 bases:

>100_bases
CAACTTGGCGTCGTAAATAATATAAACCGTTTTATGTAAAGGGCTGGTCTTTCCAGCCTTTTTATTACCAAATTTTTAAA
CTTTAATAGAGGACACATTT

Downstream 100 bases:

>100_bases
TTACACTTAGTTCTAATTGATAAAAAGTAAGGCCAAATTCAAAGTCATGAACTTGGCCTTTTTTATACTGGTTATAATAA
GTTGGTATTAGTTACAAGTA

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MAQMYFYYSAMNAGKSTTLLQSSFNYQERGMNPVIFTAAIDDRYGVGKVSSRIGLDADAHLFHTDMDMFETIKTLHEAKK
IHCVLIDECQFLTKEQVYQLTEVVDKLHIPALCYGLRTDFLGELFEGSKYLLSWADKLVELKTICHCGRKANMVIRTDEH
GVAIADGDQVAIGGNELYVSVCRSHYKEALGK

Sequences:

>Translated_192_residues
MAQMYFYYSAMNAGKSTTLLQSSFNYQERGMNPVIFTAAIDDRYGVGKVSSRIGLDADAHLFHTDMDMFETIKTLHEAKK
IHCVLIDECQFLTKEQVYQLTEVVDKLHIPALCYGLRTDFLGELFEGSKYLLSWADKLVELKTICHCGRKANMVIRTDEH
GVAIADGDQVAIGGNELYVSVCRSHYKEALGK
>Mature_191_residues
AQMYFYYSAMNAGKSTTLLQSSFNYQERGMNPVIFTAAIDDRYGVGKVSSRIGLDADAHLFHTDMDMFETIKTLHEAKKI
HCVLIDECQFLTKEQVYQLTEVVDKLHIPALCYGLRTDFLGELFEGSKYLLSWADKLVELKTICHCGRKANMVIRTDEHG
VAIADGDQVAIGGNELYVSVCRSHYKEALGK

Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1787490, Length=190, Percent_Identity=70.5263157894737, Blast_Score=293, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020633
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 21646; Mature: 21515

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00603 TK_CELLULAR_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQMYFYYSAMNAGKSTTLLQSSFNYQERGMNPVIFTAAIDDRYGVGKVSSRIGLDADAH
CCEEEEEEEECCCCCCHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCE
LFHTDMDMFETIKTLHEAKKIHCVLIDECQFLTKEQVYQLTEVVDKLHIPALCYGLRTDF
EEECHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LGELFEGSKYLLSWADKLVELKTICHCGRKANMVIRTDEHGVAIADGDQVAIGGNELYVS
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCEEEECCCHHHHH
VCRSHYKEALGK
HHHHHHHHHHCC
>Mature Secondary Structure 
AQMYFYYSAMNAGKSTTLLQSSFNYQERGMNPVIFTAAIDDRYGVGKVSSRIGLDADAH
CEEEEEEEECCCCCCHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCE
LFHTDMDMFETIKTLHEAKKIHCVLIDECQFLTKEQVYQLTEVVDKLHIPALCYGLRTDF
EEECHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LGELFEGSKYLLSWADKLVELKTICHCGRKANMVIRTDEHGVAIADGDQVAIGGNELYVS
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCEEEECCCHHHHH
VCRSHYKEALGK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA