| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is adhE [H]
Identifier: 209695322
GI number: 209695322
Start: 1989295
End: 1991946
Strand: Direct
Name: adhE [H]
Synonym: VSAL_I1855
Alternate gene names: 209695322
Gene position: 1989295-1991946 (Clockwise)
Preceding gene: 209695320
Following gene: 209695326
Centisome position: 59.83
GC content: 41.67
Gene sequence:
>2652_bases ATGCCTGTAACTAATTTAGCTGAACTTGATGCTCTAGTAGCACGTGTTAAAGCCGCGCAAAAAGAATTTGCAAGCTTTTC ACAAGAACAAGTTGATACAATATTTCGTGCTGCGTCTCTAGCTGCTTCAACTGCTCGTATCGAACTTGCAAAAATGGCAG CAGAAGAGTCTGGCATGGGCATCATGGAAGACAAAGTAATCAAAAACCATTTTGCTTCTGAGTTCATCTACAATAAATAC AAAGACGAACTAACGTGTGGCATTATCGATCGTAACGATGAAGGCGGCACGATCACAATCGCTGAACCTCTAGGTATTGT TTGTGCAATCGTTCCAACGACAAACCCTACTTCAACAGCAATCTTTAAAGCACTAATCTGTCTTAAAACACGTAATGGCT GTATCTTCTCACCGCACCCACGTGCTAAAAATGCAACTAACTACGCTGCTAAAGTCGTATTAGAAGCAGCAATTAAAGCG GGCGCACCAAAAGACATCATTGGTTGGATTGACCAACCATCTGTTGAACTATCAAACGCACTAATGAAACATGAACACAT CAACATGATCCTTGCTACTGGTGGTCCAGGCATGGTGAAAGCGGCTTATTCATCAGGTAAACCAGCTATCGGTGTTGGTG CGGGTAATACGCCTGTCGTTATCGATGAAACTGCTGATATCAAACGTGCTGTTTCTTCTATCTTAATGTCTAAAACATTC GATAACGGTGTTATCTGTGCTTCTGAGCAAGCTGCAATTGTTGTTGAGTCAATTTACGACGAAGTTAAAGCTCGTTTCGC TAAATACGGCGCTGTTATTTTAAGCAAAGAAGACGCAAATAAAGTACGTAAAGTACTACTTATTGATGGCGCACTTAACG CTAACATCGTTGGCCAACCAGCATACAAAATCGCTGAGCTAGCAAATGTTAAAGTACCTACTTCTACTAAAATTCTTATC GGTGAAGGCTTAGAAGCTTCATGGGATGACGAATTTGCTCATGAAAAGCTATCTCCTACATTAGGTTTATTCAAAGCGAA AGACTTTGAAGATGCTGTGCGTCAAGCAGGTATCGTATTAGACATAGGCGGTGTTGGTCATACGTCAGTACTTTACACAG ACCAAGATAACAACGAAGAACGTATTGCGTACTTCGGTGACAAAATGAAAACCGCTCGTATTCTTGTAAACACGCCAGCA TCTCAAGGTGGTATTGGTGACCTTTACAACTTCGAATTGGCTCCTTCATTAACACTAGGTTGTGGTTCTTGGGGTGGTAA TGCTATCTCTGAAAACGTAGGTCCTAAGCACCTTATCAACAAGAAAATTGTAGCTAAGCGAGCAGAAAATATGTTGTGGC ATAAACTACCAAAATCTATCTACTTCCGTCGCGGCTGTTTGCCAATCGCAATGAGCGATCTTGAAGGTAAAAAACGTGCA CTGATCGTTACTGACCGTTTCTTATTTAACAACGGTTACATCGATGATCTACGTTCAATCTTGAAAGAGAAAGGCATGGA AGTTGAAGTGTTCCATGAAGTAGAAGCGGATCCTACATTAGCCGTAGTTAAAGCGGGTGCAGAAGCATGTGCAAGCTACC AACCTGATGTTATCTTAGCGGTTGGTGGTGGTTCACCAATGGATGCTGCGAAAATCATGTGGGTGATGTACGAACATCCA GAAACTGATTTCGAAGATTTATCTATGCGCTTTATGGATATCCGTAAACGTATTTACAAGTTCCCTAAAATGGGCCAAAA AGCTGAACTAGTATGTATTACAACTACTTCAGGTACTGGTTCTGAAGTTACACCATTCGCTGTTGTAACCGATGAAAAAA CAGGTCAAAAATACCCATTAGCAGATTACGAGCTAACGCCAAACATGGCTGTTGTTGATGCTAACCTTGTCATGGATATG CCTAAGTCTTTATGTGCATTCGGTGGTTACGATGCAGTAACGCACGCATTAGAAGCGTATGTTTCTGTTCTTGCAAACGA ATACTCAGATGGTCACGCTCTGCAATCACTTAAGATGCTTAAAGAGTACTTACCAAGCTCTTACGCTAACGGTAAGAAAG ATCCAATCGCACGTGAGAAAGTTCACAATGCAGCAACAATCGCAGGTATGTCTTTTGCGCAGTCTTTCCTAGGTGTGTGT CACTCAATGGCGCATAAATTAGGCGCTGAATTCCATATTCCACACGGTCTTGCTAATGCGTTATTAATCTCGAATACGGT TCGTTTTAATGCGACTAACAACCCAACTAAACAAGCGGCATTCTCTCAGTACGACCGTCCTAAAGCACGTGCTCGTTACG CTGAAATTGCAGAGCATTTAGGTTACCGTGATGGTAATACTGAAACGAAAGTTAATGCGTTACTTAACTGGTTAGAAGAG CTGAAAATTGCATTGGATATCCCACTGTCAATTCAAGCCGCTGGCGTTAACGAAGCTGAATTCATGGCTAAAGTAGACAA ATTAGCTGAAGATGCATTTGATGACCAATGTACTGGTGCTAACCCACGTTACCCATTGATCAAAGAACTTAAAGAAGTAT TAATCGCTTCTTACTACGGTACGGCTTACGCTGACGTAATGGACGCACCAGAAGTGAAAGAAGTAGTAAAAGCGAAAAAA GCAAAGAAATAA
Upstream 100 bases:
>100_bases ACTTAAACGATTAAGCTTAGATGCAAGAAAGGATGTAACGCAGGATCCTTACTAAATAGTTTTTAATGAATTTTATAGTT TTATTTTTTGGAGAAACAAT
Downstream 100 bases:
>100_bases TTCGATGCTAATAAGTTAAGGTATTTTCTCCCATATTTTGAAAGTACCTGACTAATAAAAAAACCACCTATTAGATAGAG GTGGTTTTTTTATGCCTAAA
Product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 883; Mature: 882
Protein sequence:
>883_residues MPVTNLAELDALVARVKAAQKEFASFSQEQVDTIFRAASLAASTARIELAKMAAEESGMGIMEDKVIKNHFASEFIYNKY KDELTCGIIDRNDEGGTITIAEPLGIVCAIVPTTNPTSTAIFKALICLKTRNGCIFSPHPRAKNATNYAAKVVLEAAIKA GAPKDIIGWIDQPSVELSNALMKHEHINMILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVSSILMSKTF DNGVICASEQAAIVVESIYDEVKARFAKYGAVILSKEDANKVRKVLLIDGALNANIVGQPAYKIAELANVKVPTSTKILI GEGLEASWDDEFAHEKLSPTLGLFKAKDFEDAVRQAGIVLDIGGVGHTSVLYTDQDNNEERIAYFGDKMKTARILVNTPA SQGGIGDLYNFELAPSLTLGCGSWGGNAISENVGPKHLINKKIVAKRAENMLWHKLPKSIYFRRGCLPIAMSDLEGKKRA LIVTDRFLFNNGYIDDLRSILKEKGMEVEVFHEVEADPTLAVVKAGAEACASYQPDVILAVGGGSPMDAAKIMWVMYEHP ETDFEDLSMRFMDIRKRIYKFPKMGQKAELVCITTTSGTGSEVTPFAVVTDEKTGQKYPLADYELTPNMAVVDANLVMDM PKSLCAFGGYDAVTHALEAYVSVLANEYSDGHALQSLKMLKEYLPSSYANGKKDPIAREKVHNAATIAGMSFAQSFLGVC HSMAHKLGAEFHIPHGLANALLISNTVRFNATNNPTKQAAFSQYDRPKARARYAEIAEHLGYRDGNTETKVNALLNWLEE LKIALDIPLSIQAAGVNEAEFMAKVDKLAEDAFDDQCTGANPRYPLIKELKEVLIASYYGTAYADVMDAPEVKEVVKAKK AKK
Sequences:
>Translated_883_residues MPVTNLAELDALVARVKAAQKEFASFSQEQVDTIFRAASLAASTARIELAKMAAEESGMGIMEDKVIKNHFASEFIYNKY KDELTCGIIDRNDEGGTITIAEPLGIVCAIVPTTNPTSTAIFKALICLKTRNGCIFSPHPRAKNATNYAAKVVLEAAIKA GAPKDIIGWIDQPSVELSNALMKHEHINMILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVSSILMSKTF DNGVICASEQAAIVVESIYDEVKARFAKYGAVILSKEDANKVRKVLLIDGALNANIVGQPAYKIAELANVKVPTSTKILI GEGLEASWDDEFAHEKLSPTLGLFKAKDFEDAVRQAGIVLDIGGVGHTSVLYTDQDNNEERIAYFGDKMKTARILVNTPA SQGGIGDLYNFELAPSLTLGCGSWGGNAISENVGPKHLINKKIVAKRAENMLWHKLPKSIYFRRGCLPIAMSDLEGKKRA LIVTDRFLFNNGYIDDLRSILKEKGMEVEVFHEVEADPTLAVVKAGAEACASYQPDVILAVGGGSPMDAAKIMWVMYEHP ETDFEDLSMRFMDIRKRIYKFPKMGQKAELVCITTTSGTGSEVTPFAVVTDEKTGQKYPLADYELTPNMAVVDANLVMDM PKSLCAFGGYDAVTHALEAYVSVLANEYSDGHALQSLKMLKEYLPSSYANGKKDPIAREKVHNAATIAGMSFAQSFLGVC HSMAHKLGAEFHIPHGLANALLISNTVRFNATNNPTKQAAFSQYDRPKARARYAEIAEHLGYRDGNTETKVNALLNWLEE LKIALDIPLSIQAAGVNEAEFMAKVDKLAEDAFDDQCTGANPRYPLIKELKEVLIASYYGTAYADVMDAPEVKEVVKAKK AKK >Mature_882_residues PVTNLAELDALVARVKAAQKEFASFSQEQVDTIFRAASLAASTARIELAKMAAEESGMGIMEDKVIKNHFASEFIYNKYK DELTCGIIDRNDEGGTITIAEPLGIVCAIVPTTNPTSTAIFKALICLKTRNGCIFSPHPRAKNATNYAAKVVLEAAIKAG APKDIIGWIDQPSVELSNALMKHEHINMILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVSSILMSKTFD NGVICASEQAAIVVESIYDEVKARFAKYGAVILSKEDANKVRKVLLIDGALNANIVGQPAYKIAELANVKVPTSTKILIG EGLEASWDDEFAHEKLSPTLGLFKAKDFEDAVRQAGIVLDIGGVGHTSVLYTDQDNNEERIAYFGDKMKTARILVNTPAS QGGIGDLYNFELAPSLTLGCGSWGGNAISENVGPKHLINKKIVAKRAENMLWHKLPKSIYFRRGCLPIAMSDLEGKKRAL IVTDRFLFNNGYIDDLRSILKEKGMEVEVFHEVEADPTLAVVKAGAEACASYQPDVILAVGGGSPMDAAKIMWVMYEHPE TDFEDLSMRFMDIRKRIYKFPKMGQKAELVCITTTSGTGSEVTPFAVVTDEKTGQKYPLADYELTPNMAVVDANLVMDMP KSLCAFGGYDAVTHALEAYVSVLANEYSDGHALQSLKMLKEYLPSSYANGKKDPIAREKVHNAATIAGMSFAQSFLGVCH SMAHKLGAEFHIPHGLANALLISNTVRFNATNNPTKQAAFSQYDRPKARARYAEIAEHLGYRDGNTETKVNALLNWLEEL KIALDIPLSIQAAGVNEAEFMAKVDKLAEDAFDDQCTGANPRYPLIKELKEVLIASYYGTAYADVMDAPEVKEVVKAKKA KK
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=384, Percent_Identity=25, Blast_Score=79, Evalue=2e-14, Organism=Escherichia coli, GI1787493, Length=869, Percent_Identity=74.5684695051784, Blast_Score=1340, Evalue=0.0, Organism=Escherichia coli, GI48994951, Length=385, Percent_Identity=33.7662337662338, Blast_Score=184, Evalue=2e-47, Organism=Escherichia coli, GI1789163, Length=413, Percent_Identity=31.7191283292978, Blast_Score=182, Evalue=8e-47, Organism=Escherichia coli, GI1788797, Length=370, Percent_Identity=33.7837837837838, Blast_Score=180, Evalue=3e-46, Organism=Escherichia coli, GI87082107, Length=376, Percent_Identity=30.3191489361702, Blast_Score=179, Evalue=1e-45, Organism=Escherichia coli, GI1789386, Length=389, Percent_Identity=26.9922879177378, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17537053, Length=302, Percent_Identity=26.158940397351, Blast_Score=104, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321181, Length=391, Percent_Identity=31.4578005115089, Blast_Score=180, Evalue=8e-46, Organism=Drosophila melanogaster, GI24657991, Length=320, Percent_Identity=25, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 95863; Mature: 95732
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTNLAELDALVARVKAAQKEFASFSQEQVDTIFRAASLAASTARIELAKMAAEESGMG CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IMEDKVIKNHFASEFIYNKYKDELTCGIIDRNDEGGTITIAEPLGIVCAIVPTTNPTSTA CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHH IFKALICLKTRNGCIFSPHPRAKNATNYAAKVVLEAAIKAGAPKDIIGWIDQPSVELSNA HHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMKHEHINMILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVSSILMSKTF HHHHCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCC DNGVICASEQAAIVVESIYDEVKARFAKYGAVILSKEDANKVRKVLLIDGALNANIVGQP CCCEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHEEEEEEECCCCCCEECCC AYKIAELANVKVPTSTKILIGEGLEASWDDEFAHEKLSPTLGLFKAKDFEDAVRQAGIVL HHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHCCEEE DIGGVGHTSVLYTDQDNNEERIAYFGDKMKTARILVNTPASQGGIGDLYNFELAPSLTLG EECCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCEEEE CGSWGGNAISENVGPKHLINKKIVAKRAENMLWHKLPKSIYFRRGCLPIAMSDLEGKKRA CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCEE LIVTDRFLFNNGYIDDLRSILKEKGMEVEVFHEVEADPTLAVVKAGAEACASYQPDVILA EEEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHCHHHHHCCCCCEEEE VGGGSPMDAAKIMWVMYEHPETDFEDLSMRFMDIRKRIYKFPKMGQKAELVCITTTSGTG ECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC SEVTPFAVVTDEKTGQKYPLADYELTPNMAVVDANLVMDMPKSLCAFGGYDAVTHALEAY CCCCCEEEEECCCCCCCCCCCCCEECCCEEEEEHHHHHHCHHHHHHCCCHHHHHHHHHHH VSVLANEYSDGHALQSLKMLKEYLPSSYANGKKDPIAREKVHNAATIAGMSFAQSFLGVC HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HSMAHKLGAEFHIPHGLANALLISNTVRFNATNNPTKQAAFSQYDRPKARARYAEIAEHL HHHHHHCCCCEECCCHHHHHHHEECEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC GYRDGNTETKVNALLNWLEELKIALDIPLSIQAAGVNEAEFMAKVDKLAEDAFDDQCTGA CCCCCCCHHHHHHHHHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC NPRYPLIKELKEVLIASYYGTAYADVMDAPEVKEVVKAKKAKK CCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure PVTNLAELDALVARVKAAQKEFASFSQEQVDTIFRAASLAASTARIELAKMAAEESGMG CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IMEDKVIKNHFASEFIYNKYKDELTCGIIDRNDEGGTITIAEPLGIVCAIVPTTNPTSTA CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHH IFKALICLKTRNGCIFSPHPRAKNATNYAAKVVLEAAIKAGAPKDIIGWIDQPSVELSNA HHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMKHEHINMILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVSSILMSKTF HHHHCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCC DNGVICASEQAAIVVESIYDEVKARFAKYGAVILSKEDANKVRKVLLIDGALNANIVGQP CCCEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHEEEEEEECCCCCCEECCC AYKIAELANVKVPTSTKILIGEGLEASWDDEFAHEKLSPTLGLFKAKDFEDAVRQAGIVL HHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHCCEEE DIGGVGHTSVLYTDQDNNEERIAYFGDKMKTARILVNTPASQGGIGDLYNFELAPSLTLG EECCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCEEEE CGSWGGNAISENVGPKHLINKKIVAKRAENMLWHKLPKSIYFRRGCLPIAMSDLEGKKRA CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCCEE LIVTDRFLFNNGYIDDLRSILKEKGMEVEVFHEVEADPTLAVVKAGAEACASYQPDVILA EEEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHCHHHHHCCCCCEEEE VGGGSPMDAAKIMWVMYEHPETDFEDLSMRFMDIRKRIYKFPKMGQKAELVCITTTSGTG ECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC SEVTPFAVVTDEKTGQKYPLADYELTPNMAVVDANLVMDMPKSLCAFGGYDAVTHALEAY CCCCCEEEEECCCCCCCCCCCCCEECCCEEEEEHHHHHHCHHHHHHCCCHHHHHHHHHHH VSVLANEYSDGHALQSLKMLKEYLPSSYANGKKDPIAREKVHNAATIAGMSFAQSFLGVC HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HSMAHKLGAEFHIPHGLANALLISNTVRFNATNNPTKQAAFSQYDRPKARARYAEIAEHL HHHHHHCCCCEECCCHHHHHHHEECEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC GYRDGNTETKVNALLNWLEELKIALDIPLSIQAAGVNEAEFMAKVDKLAEDAFDDQCTGA CCCCCCCHHHHHHHHHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC NPRYPLIKELKEVLIASYYGTAYADVMDAPEVKEVVKAKKAKK CCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]