Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695292

Identifier: 209695292

GI number: 209695292

Start: 1944970

End: 1947069

Strand: Direct

Name: 209695292

Synonym: VSAL_I1820

Alternate gene names: NA

Gene position: 1944970-1947069 (Clockwise)

Preceding gene: 209695291

Following gene: 209695295

Centisome position: 58.49

GC content: 36.9

Gene sequence:

>2100_bases
ATGAAACTAAGAACAATTTTTATTATTGTATTATCAAATTTGCTTTTTGCTTGTGGTGGAGAGAACAGCGGAGCACCATC
CCAAGGTAAACGCACTGAAAATTGGAATGTACCTTTAGCGCAGTCAGTGGCAGTTCAAGGTGACGTATTTTCTGGAAAAA
CAATAAATGGTAATTACACATACTTTGACCCAAATTCAAAAGCTCGCCCAGAAAATTTAAGCGAATTTAGGTGGGTGATT
GATAATGTTACTAAAAGTACATCCCTATCATTTGATCTTCTTGATGAGCATGTAGGAAAGGATGTTGTTTTTTGTATTAC
ACCAATAGCCCTTGGAAACGTTAATTTTGTTGGTGATGAAGTTTGTAGTTTATCGGTAACGGTTAATACTCCAAGTTCAA
ATGTAGTACCTGAAGCATTAAATGTAGCGATTAATCCAGAGGTAAATCTGATTGCTGGAGACAAAATATCATCATCTTAT
GTTTATTATGATCAAGATAATGATGCAGAATTGAACAGTAAGTTGTTATGGTTTATTGATGACATATTAGTGCAAACTGG
TGGGGTTGATTTTGATTTGCCAGCGGACGCAGAATATAAAATATTGAAATTTTGTGTAACGCCAATATCGAATGCGTCTC
CGACAACAGGAGTTCAAGTTTGTACACAGTCGGATCAAGTAAAGCCTAAAGTGGGTTCTGTACCTGTTGCAAATAATGTA
TCAATTACTGGTGCTCTTACATCAGGCACTAATCTTGTGGGTTCATATTTATATACAGATATAGATGGTGATTTAGAAGG
CATATCATTATTTAAGTGGCAACTATCGGGTGTTGACATTAGTGGTGTCTCTATAAATAGTTATACTCCATCAGTTACTG
ATGAAGGAGAAACACTCAGTTTTTGTGTTACACCTGTAGCGAGTACTGGTGAACCAAAAATAGGGCTTGAAGCTTGTTAT
AATGCGGGTATTATCTCGCCTCCTTTGGGGTTCCCTCCCTCAGCAACGGTTTCAATTAATAATAACTCAAATTCTCCAGT
CGCTGGTTTTAGATTACCTGCTACATATACTTATATTCCAGGTATAGATGGACTTGCTCAAGGTAGCTCTATTGTTACAT
GGAGTGTTGATGGTGTGGATTCTGGTGTTACTTGTTACCCATTTGCAATTCCTTGTAATTATACAATCAAAGATAATGAT
GCAGGGAAAGTAATACAATATTGTGTTACACCAGTGAATGTTAATGGTGCGAGTGGTAGCAAAGTATGTGAGGATATCGT
TGGAACATCTATTAAATATAGCGGTAACTTTAATCTATTTGAGAATATTAATGTTAGTTTGCAAGGGTACTCTAATAATA
TCAAAACCAGTTGGGGAGTCACATCAAGTTTTGGTATTCAAGACCTACAAAGTACAGGGTTAACATATAAAATAGAATAT
TTAGATAAGCTAGGGTTTACAAGTTTAGCTTACGAACTTGTTAGTCAAGATATTGAGTTTTGTGTTGAAGATCTTGATAA
AAGCTACAATAAGTATTGTCGCCGAGTATCTGATGATTCATCAAGTCAATATCTAACGGTTAGTGATGGTACTTTTGTTG
GGGGGGGGGTTGTGAACCGATATAACACACCTAAAGGCATTGCCCCTGCGACAGTATATCAAGATATGACAACAGGTCTT
AAATTCATGAGACCATTAACTCCGGAAGAATCTGAATTTGTCGGTGTAATTGCTGATAGTACTATGGGAGATGGGAACGT
AATTATAGCTCATTATTCTTTAGCTAACGCAAGGCAATTATGTTCTTTACTACCCGTTGATGGTGGGGGATGGCGTTTAC
CAACATTTGATGAATTACGTAACTTTAATACTAACTTATCAACGTATAATAACCTAGTTGTTGGTAGCAGTCCTCCCGCT
ACTTTATCTTCACTTACCTATGAGTTAGGTTGGAGGGGGTTACGTGCAATATGGAGTGGTATTGGGTATTCATTACGGGC
ATCTGATGGGAGATTGTATAATACTCAACCTTATGCTGAGGGAGAGGTTTCCATTGCAGATCAAGATACTAAATTTTTTG
CAGTAACTTGCGTTAAGTAA

Upstream 100 bases:

>100_bases
GTGAGACCGATCCTGTTGCCGATAATAACACGCTAAAAGGGCGATCAATGAACCGTCGTGTTGATTTAATTTCTCCTGCT
TTTACTTCAGAGGTTAAACC

Downstream 100 bases:

>100_bases
TAATAAAAGAGAACTCTGTGTTTATTAAAACCAGAGTTTTCTTTTGAATTTACATATGCAAAATTAATTATGAATCGCAA
CAATGATAAACATCATTTAT

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MKLRTIFIIVLSNLLFACGGENSGAPSQGKRTENWNVPLAQSVAVQGDVFSGKTINGNYTYFDPNSKARPENLSEFRWVI
DNVTKSTSLSFDLLDEHVGKDVVFCITPIALGNVNFVGDEVCSLSVTVNTPSSNVVPEALNVAINPEVNLIAGDKISSSY
VYYDQDNDAELNSKLLWFIDDILVQTGGVDFDLPADAEYKILKFCVTPISNASPTTGVQVCTQSDQVKPKVGSVPVANNV
SITGALTSGTNLVGSYLYTDIDGDLEGISLFKWQLSGVDISGVSINSYTPSVTDEGETLSFCVTPVASTGEPKIGLEACY
NAGIISPPLGFPPSATVSINNNSNSPVAGFRLPATYTYIPGIDGLAQGSSIVTWSVDGVDSGVTCYPFAIPCNYTIKDND
AGKVIQYCVTPVNVNGASGSKVCEDIVGTSIKYSGNFNLFENINVSLQGYSNNIKTSWGVTSSFGIQDLQSTGLTYKIEY
LDKLGFTSLAYELVSQDIEFCVEDLDKSYNKYCRRVSDDSSSQYLTVSDGTFVGGGVVNRYNTPKGIAPATVYQDMTTGL
KFMRPLTPEESEFVGVIADSTMGDGNVIIAHYSLANARQLCSLLPVDGGGWRLPTFDELRNFNTNLSTYNNLVVGSSPPA
TLSSLTYELGWRGLRAIWSGIGYSLRASDGRLYNTQPYAEGEVSIADQDTKFFAVTCVK

Sequences:

>Translated_699_residues
MKLRTIFIIVLSNLLFACGGENSGAPSQGKRTENWNVPLAQSVAVQGDVFSGKTINGNYTYFDPNSKARPENLSEFRWVI
DNVTKSTSLSFDLLDEHVGKDVVFCITPIALGNVNFVGDEVCSLSVTVNTPSSNVVPEALNVAINPEVNLIAGDKISSSY
VYYDQDNDAELNSKLLWFIDDILVQTGGVDFDLPADAEYKILKFCVTPISNASPTTGVQVCTQSDQVKPKVGSVPVANNV
SITGALTSGTNLVGSYLYTDIDGDLEGISLFKWQLSGVDISGVSINSYTPSVTDEGETLSFCVTPVASTGEPKIGLEACY
NAGIISPPLGFPPSATVSINNNSNSPVAGFRLPATYTYIPGIDGLAQGSSIVTWSVDGVDSGVTCYPFAIPCNYTIKDND
AGKVIQYCVTPVNVNGASGSKVCEDIVGTSIKYSGNFNLFENINVSLQGYSNNIKTSWGVTSSFGIQDLQSTGLTYKIEY
LDKLGFTSLAYELVSQDIEFCVEDLDKSYNKYCRRVSDDSSSQYLTVSDGTFVGGGVVNRYNTPKGIAPATVYQDMTTGL
KFMRPLTPEESEFVGVIADSTMGDGNVIIAHYSLANARQLCSLLPVDGGGWRLPTFDELRNFNTNLSTYNNLVVGSSPPA
TLSSLTYELGWRGLRAIWSGIGYSLRASDGRLYNTQPYAEGEVSIADQDTKFFAVTCVK
>Mature_699_residues
MKLRTIFIIVLSNLLFACGGENSGAPSQGKRTENWNVPLAQSVAVQGDVFSGKTINGNYTYFDPNSKARPENLSEFRWVI
DNVTKSTSLSFDLLDEHVGKDVVFCITPIALGNVNFVGDEVCSLSVTVNTPSSNVVPEALNVAINPEVNLIAGDKISSSY
VYYDQDNDAELNSKLLWFIDDILVQTGGVDFDLPADAEYKILKFCVTPISNASPTTGVQVCTQSDQVKPKVGSVPVANNV
SITGALTSGTNLVGSYLYTDIDGDLEGISLFKWQLSGVDISGVSINSYTPSVTDEGETLSFCVTPVASTGEPKIGLEACY
NAGIISPPLGFPPSATVSINNNSNSPVAGFRLPATYTYIPGIDGLAQGSSIVTWSVDGVDSGVTCYPFAIPCNYTIKDND
AGKVIQYCVTPVNVNGASGSKVCEDIVGTSIKYSGNFNLFENINVSLQGYSNNIKTSWGVTSSFGIQDLQSTGLTYKIEY
LDKLGFTSLAYELVSQDIEFCVEDLDKSYNKYCRRVSDDSSSQYLTVSDGTFVGGGVVNRYNTPKGIAPATVYQDMTTGL
KFMRPLTPEESEFVGVIADSTMGDGNVIIAHYSLANARQLCSLLPVDGGGWRLPTFDELRNFNTNLSTYNNLVVGSSPPA
TLSSLTYELGWRGLRAIWSGIGYSLRASDGRLYNTQPYAEGEVSIADQDTKFFAVTCVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75109; Mature: 75109

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRTIFIIVLSNLLFACGGENSGAPSQGKRTENWNVPLAQSVAVQGDVFSGKTINGNYT
CCCCEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCEECCCEE
YFDPNSKARPENLSEFRWVIDNVTKSTSLSFDLLDEHVGKDVVFCITPIALGNVNFVGDE
EECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECEEECCCEEECCC
VCSLSVTVNTPSSNVVPEALNVAINPEVNLIAGDKISSSYVYYDQDNDAELNSKLLWFID
EEEEEEEEECCCCCCCCHHHEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEH
DILVQTGGVDFDLPADAEYKILKFCVTPISNASPTTGVQVCTQSDQVKPKVGSVPVANNV
HHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
SITGALTSGTNLVGSYLYTDIDGDLEGISLFKWQLSGVDISGVSINSYTPSVTDEGETLS
EEEEEECCCCHHHEEEEEEECCCCCCCEEEEEEEECCEEEECEEECCCCCCCCCCCCEEE
FCVTPVASTGEPKIGLEACYNAGIISPPLGFPPSATVSINNNSNSPVAGFRLPATYTYIP
EEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCEEEEECC
GIDGLAQGSSIVTWSVDGVDSGVTCYPFAIPCNYTIKDNDAGKVIQYCVTPVNVNGASGS
CCCCCCCCCEEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCEEEEEECEEEECCCCCH
KVCEDIVGTSIKYSGNFNLFENINVSLQGYSNNIKTSWGVTSSFGIQDLQSTGLTYKIEY
HHHHHHHCCEEEECCCCEEEEECEEEEEECCCCCEECCCCCCCCCCHHHHHCCCEEEEEE
LDKLGFTSLAYELVSQDIEFCVEDLDKSYNKYCRRVSDDSSSQYLTVSDGTFVGGGVVNR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCEEEC
YNTPKGIAPATVYQDMTTGLKFMRPLTPEESEFVGVIADSTMGDGNVIIAHYSLANARQL
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECHHCHHHH
CSLLPVDGGGWRLPTFDELRNFNTNLSTYNNLVVGSSPPATLSSLTYELGWRGLRAIWSG
HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHH
IGYSLRASDGRLYNTQPYAEGEVSIADQDTKFFAVTCVK
CCCEEECCCCEEECCCCCCCCEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MKLRTIFIIVLSNLLFACGGENSGAPSQGKRTENWNVPLAQSVAVQGDVFSGKTINGNYT
CCCCEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCEECCCEE
YFDPNSKARPENLSEFRWVIDNVTKSTSLSFDLLDEHVGKDVVFCITPIALGNVNFVGDE
EECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECEEECCCEEECCC
VCSLSVTVNTPSSNVVPEALNVAINPEVNLIAGDKISSSYVYYDQDNDAELNSKLLWFID
EEEEEEEEECCCCCCCCHHHEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEH
DILVQTGGVDFDLPADAEYKILKFCVTPISNASPTTGVQVCTQSDQVKPKVGSVPVANNV
HHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
SITGALTSGTNLVGSYLYTDIDGDLEGISLFKWQLSGVDISGVSINSYTPSVTDEGETLS
EEEEEECCCCHHHEEEEEEECCCCCCCEEEEEEEECCEEEECEEECCCCCCCCCCCCEEE
FCVTPVASTGEPKIGLEACYNAGIISPPLGFPPSATVSINNNSNSPVAGFRLPATYTYIP
EEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCEEEEECC
GIDGLAQGSSIVTWSVDGVDSGVTCYPFAIPCNYTIKDNDAGKVIQYCVTPVNVNGASGS
CCCCCCCCCEEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCEEEEEECEEEECCCCCH
KVCEDIVGTSIKYSGNFNLFENINVSLQGYSNNIKTSWGVTSSFGIQDLQSTGLTYKIEY
HHHHHHHCCEEEECCCCEEEEECEEEEEECCCCCEECCCCCCCCCCHHHHHCCCEEEEEE
LDKLGFTSLAYELVSQDIEFCVEDLDKSYNKYCRRVSDDSSSQYLTVSDGTFVGGGVVNR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCEEEC
YNTPKGIAPATVYQDMTTGLKFMRPLTPEESEFVGVIADSTMGDGNVIIAHYSLANARQL
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECHHCHHHH
CSLLPVDGGGWRLPTFDELRNFNTNLSTYNNLVVGSSPPATLSSLTYELGWRGLRAIWSG
HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHH
IGYSLRASDGRLYNTQPYAEGEVSIADQDTKFFAVTCVK
CCCEEECCCCEEECCCCCCCCEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA