Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695184

Identifier: 209695184

GI number: 209695184

Start: 1786702

End: 1787466

Strand: Direct

Name: 209695184

Synonym: VSAL_I1690

Alternate gene names: NA

Gene position: 1786702-1787466 (Clockwise)

Preceding gene: 209695181

Following gene: 209695186

Centisome position: 53.73

GC content: 35.69

Gene sequence:

>765_bases
ATGAATATTGCTCTTATTGTTGGACTGTTTGCAATTCTACTAACCTTGATTATTGGCTATAATGTGATTGTTCAGTACAG
AACAAAAATTGAATCCGCTAAAAAACAAGAATCTGCAAAACACATGATGATTATTGATTCTACCGAAGAGTTAATCAGTA
ATGCCCACCATTTACCTTACAGTAAAGAGTTATTAGTCTGCTTAAATCAACGAATTCTAGACGCTTTACGCTCAATTGCT
GAATTATCACCCACTGATCGTTCATACCCTGCACGCATTGAAAACATGGAACAACAACTTCAACAGCTAAAAACAAATTA
TACTGGCGGCGACAGCACGAATTTCAAAGTGCCAAGCAATGATAAACAAGCCATCGTTATGTTGAAGTTAGTTAAACGCT
TACGAGATACGCTTCGTGCGGAACATAAAAAAGGCCGTGTAAATACCCAAGTCTTTGTTGCTGAAAACGCACGTCTTGAA
TCAATTCAAGTTCGAATTAATATCGAAAACGTAGTAAAGCGAGCCAAAGAAGCAACTCAACGTGGCCAAGCAGGTACTGC
TCGTCAATTACTTAAAAAAGGGATTGATGCCCTATCAAGTAAAAATGATGGTTATTCAAATAAAGCACGAACTCAACTGC
AAGATATGCTTGATGAATTGAATAACAAAACAAAGAGAAAACAAGATAAAGAACTTCAAGACCAATTAGATAAAAATAAA
GATGATGAGATTGATGTCTTATTTCAACCGAAAAAGAAATGGTAA

Upstream 100 bases:

>100_bases
CCTTTGCGCTAATTTGTTATTTGGAGTTAGCCGCCTTCTATTCATTTAGTTTACAAGGTGTTACACTGGCAACTATTACT
ACTGGATGTATGATTAAACT

Downstream 100 bases:

>100_bases
TAACCACACGCTAATTGCCTAAGCATACATCAAATAAAAAAGGTCGCACAATGCGACCTTTTTTATTATCTGTTATTTAT
TAATAACAATAAGATTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNIALIVGLFAILLTLIIGYNVIVQYRTKIESAKKQESAKHMMIIDSTEELISNAHHLPYSKELLVCLNQRILDALRSIA
ELSPTDRSYPARIENMEQQLQQLKTNYTGGDSTNFKVPSNDKQAIVMLKLVKRLRDTLRAEHKKGRVNTQVFVAENARLE
SIQVRINIENVVKRAKEATQRGQAGTARQLLKKGIDALSSKNDGYSNKARTQLQDMLDELNNKTKRKQDKELQDQLDKNK
DDEIDVLFQPKKKW

Sequences:

>Translated_254_residues
MNIALIVGLFAILLTLIIGYNVIVQYRTKIESAKKQESAKHMMIIDSTEELISNAHHLPYSKELLVCLNQRILDALRSIA
ELSPTDRSYPARIENMEQQLQQLKTNYTGGDSTNFKVPSNDKQAIVMLKLVKRLRDTLRAEHKKGRVNTQVFVAENARLE
SIQVRINIENVVKRAKEATQRGQAGTARQLLKKGIDALSSKNDGYSNKARTQLQDMLDELNNKTKRKQDKELQDQLDKNK
DDEIDVLFQPKKKW
>Mature_254_residues
MNIALIVGLFAILLTLIIGYNVIVQYRTKIESAKKQESAKHMMIIDSTEELISNAHHLPYSKELLVCLNQRILDALRSIA
ELSPTDRSYPARIENMEQQLQQLKTNYTGGDSTNFKVPSNDKQAIVMLKLVKRLRDTLRAEHKKGRVNTQVFVAENARLE
SIQVRINIENVVKRAKEATQRGQAGTARQLLKKGIDALSSKNDGYSNKARTQLQDMLDELNNKTKRKQDKELQDQLDKNK
DDEIDVLFQPKKKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29084; Mature: 29084

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIALIVGLFAILLTLIIGYNVIVQYRTKIESAKKQESAKHMMIIDSTEELISNAHHLPY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCC
SKELLVCLNQRILDALRSIAELSPTDRSYPARIENMEQQLQQLKTNYTGGDSTNFKVPSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DKQAIVMLKLVKRLRDTLRAEHKKGRVNTQVFVAENARLESIQVRINIENVVKRAKEATQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHH
RGQAGTARQLLKKGIDALSSKNDGYSNKARTQLQDMLDELNNKTKRKQDKELQDQLDKNK
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDEIDVLFQPKKKW
CCCEEEEECCCCCC
>Mature Secondary Structure
MNIALIVGLFAILLTLIIGYNVIVQYRTKIESAKKQESAKHMMIIDSTEELISNAHHLPY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCC
SKELLVCLNQRILDALRSIAELSPTDRSYPARIENMEQQLQQLKTNYTGGDSTNFKVPSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DKQAIVMLKLVKRLRDTLRAEHKKGRVNTQVFVAENARLESIQVRINIENVVKRAKEATQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHH
RGQAGTARQLLKKGIDALSSKNDGYSNKARTQLQDMLDELNNKTKRKQDKELQDQLDKNK
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDEIDVLFQPKKKW
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA