Click here to switch to the map view.

The map label for this gene is yohJ [C]

Identifier: 209695176

GI number: 209695176

Start: 1777055

End: 1777387

Strand: Direct

Name: yohJ [C]

Synonym: VSAL_I1681

Alternate gene names: 209695176

Gene position: 1777055-1777387 (Clockwise)

Preceding gene: 209695175

Following gene: 209695177

Centisome position: 53.44

GC content: 40.54

Gene sequence:

>333_bases
TTGGATCTTTGGATCTTTGCTTCTTTGTTTGCAGGAAATGGCATTCAATCTTGGTTATCCATATCGGTACCTGGCAGCAT
TATTGGGATGCTGATATTATTTACCGCCATGGTGGTTGGTGTCTGTAAGCCAGATTGGACGGCCACTGGCTGTCAGTTCT
TTATGCGTAATATGTTAATCTTATTTATTCCAATTTCGGTTGGTTTAATGACGCATTTCGATTTACTGCTGACCAATGCA
ATACCCATTATTGTCAGCACTGCTGGTGGTTCGCTATTAGTGCTCGTTTGTCTTTCATTATTTATTGATCGCCTTGAAAG
AGGTAAGCACTAA

Upstream 100 bases:

>100_bases
CTTGAGTCTGAAGGTAATGAGAAAAAGACTGCGATTCTTCGCGCCGTTTATAATTACGTACAACAGTTAGTATCATGATT
AAATATATTTACTCTTTTGC

Downstream 100 bases:

>100_bases
TGTGGGTAATTCTGACTGTTATTGTTTTCTATTCTGCTCGTTGGTTTGCAAAGCGCTACCCTCACCCATTAAATAACCCT
CTATTGTTGAGTGTTATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDLWIFASLFAGNGIQSWLSISVPGSIIGMLILFTAMVVGVCKPDWTATGCQFFMRNMLILFIPISVGLMTHFDLLLTNA
IPIIVSTAGGSLLVLVCLSLFIDRLERGKH

Sequences:

>Translated_110_residues
MDLWIFASLFAGNGIQSWLSISVPGSIIGMLILFTAMVVGVCKPDWTATGCQFFMRNMLILFIPISVGLMTHFDLLLTNA
IPIIVSTAGGSLLVLVCLSLFIDRLERGKH
>Mature_110_residues
MDLWIFASLFAGNGIQSWLSISVPGSIIGMLILFTAMVVGVCKPDWTATGCQFFMRNMLILFIPISVGLMTHFDLLLTNA
IPIIVSTAGGSLLVLVCLSLFIDRLERGKH

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=95, Percent_Identity=44.2105263157895, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 12002; Mature: 12002

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLWIFASLFAGNGIQSWLSISVPGSIIGMLILFTAMVVGVCKPDWTATGCQFFMRNMLI
CCHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LFIPISVGLMTHFDLLLTNAIPIIVSTAGGSLLVLVCLSLFIDRLERGKH
HHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLWIFASLFAGNGIQSWLSISVPGSIIGMLILFTAMVVGVCKPDWTATGCQFFMRNMLI
CCHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LFIPISVGLMTHFDLLLTNAIPIIVSTAGGSLLVLVCLSLFIDRLERGKH
HHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]