Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695161

Identifier: 209695161

GI number: 209695161

Start: 1761156

End: 1761431

Strand: Direct

Name: 209695161

Synonym: VSAL_I1665

Alternate gene names: NA

Gene position: 1761156-1761431 (Clockwise)

Preceding gene: 209695160

Following gene: 209695162

Centisome position: 52.96

GC content: 39.86

Gene sequence:

>276_bases
ATGGACAACAAACTTACCACGAAAGACTTTCTCAGAGTATTCGATTGTATTCGTTCATCTGGCGACCTACTGGATGATAA
ATATTTCGTCGGCGAAGTGTATGCGTGGCATGATTACGATGGTTACACCTGCTGGTTAGGCTACAGAGATGTTACCGTCA
CGCTAATGTTCCATGGCTCACTTAAAATAGAATTCGACAAGTCATCAAACTACTCTGATTTTACTAAACAATGCTTGGCA
ATGATTACAGCAAATCATTATGATAAAGAGGGCTAA

Upstream 100 bases:

>100_bases
TTAGTAACCTACATACTCTTGGTGATCTAAATATGGAGATCAATCGTAGTTAGTTTAGGACAACATATTGTTCCCATCAC
ATACGAGACAGGAGTTGCCT

Downstream 100 bases:

>100_bases
GCATGATTGATTTTACAAAGCCTACAGAGTATCAAAAGTGGTTAGCGGTAAATGACAACGTGATGGGCGGAATTTCAATG
GGACGACTCACCTATGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MDNKLTTKDFLRVFDCIRSSGDLLDDKYFVGEVYAWHDYDGYTCWLGYRDVTVTLMFHGSLKIEFDKSSNYSDFTKQCLA
MITANHYDKEG

Sequences:

>Translated_91_residues
MDNKLTTKDFLRVFDCIRSSGDLLDDKYFVGEVYAWHDYDGYTCWLGYRDVTVTLMFHGSLKIEFDKSSNYSDFTKQCLA
MITANHYDKEG
>Mature_91_residues
MDNKLTTKDFLRVFDCIRSSGDLLDDKYFVGEVYAWHDYDGYTCWLGYRDVTVTLMFHGSLKIEFDKSSNYSDFTKQCLA
MITANHYDKEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10661; Mature: 10661

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKLTTKDFLRVFDCIRSSGDLLDDKYFVGEVYAWHDYDGYTCWLGYRDVTVTLMFHGS
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCEEEEEEEECE
LKIEFDKSSNYSDFTKQCLAMITANHYDKEG
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNKLTTKDFLRVFDCIRSSGDLLDDKYFVGEVYAWHDYDGYTCWLGYRDVTVTLMFHGS
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCEEEEEEEECE
LKIEFDKSSNYSDFTKQCLAMITANHYDKEG
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA