Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695137
Identifier: 209695137
GI number: 209695137
Start: 1743084
End: 1743371
Strand: Direct
Name: 209695137
Synonym: VSAL_I1638
Alternate gene names: NA
Gene position: 1743084-1743371 (Clockwise)
Preceding gene: 209695136
Following gene: 209695138
Centisome position: 52.42
GC content: 40.62
Gene sequence:
>288_bases ATGGAGATTATTATGGCTACTGCATTACCCCGTATTACAGCACGTGTAGATATTGATACACAAGAACTACTGTCTCAAGC TGCGGCCATTGCCGGTATGTCTAGCATTAACTCATTTGTGCTTAGTGCGGCTGTAGAAAAAGCAAAAACTATTATGGAAC GTGAACGAGCCCTACAACTAAGCCAGCAAGATGCTATGACGTTAATGACTGCGTTAGACCAACCAGCTAAACCAAATAAC AAATTACAAAAAGCCGCTTCACGTTATATGGATAAAACTCAAGAATGA
Upstream 100 bases:
>100_bases AACCGTATTAATGCGATTATTAACCGCGTGCCAAAGTGACACAACACTTGTCAGCGCATAATAATTAAACTACAATTCAC TTGTGCCACTTTGACACTGA
Downstream 100 bases:
>100_bases ATACTGTCCAATTAGAAAAAGCTAAACATGACCGAAACCGTTTTGATTGTGGCATTACCGCACTCAATAATTACTTAAAA GTTATGGCAAGCCAACAAGC
Product: phage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQLSQQDAMTLMTALDQPAKPNN KLQKAASRYMDKTQE
Sequences:
>Translated_95_residues MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQLSQQDAMTLMTALDQPAKPNN KLQKAASRYMDKTQE >Mature_95_residues MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQLSQQDAMTLMTALDQPAKPNN KLQKAASRYMDKTQE
Specific function: Unknown
COG id: COG4453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10425; Mature: 10425
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQL CCHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQQDAMTLMTALDQPAKPNNKLQKAASRYMDKTQE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQL CCHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQQDAMTLMTALDQPAKPNNKLQKAASRYMDKTQE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA