Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695137

Identifier: 209695137

GI number: 209695137

Start: 1743084

End: 1743371

Strand: Direct

Name: 209695137

Synonym: VSAL_I1638

Alternate gene names: NA

Gene position: 1743084-1743371 (Clockwise)

Preceding gene: 209695136

Following gene: 209695138

Centisome position: 52.42

GC content: 40.62

Gene sequence:

>288_bases
ATGGAGATTATTATGGCTACTGCATTACCCCGTATTACAGCACGTGTAGATATTGATACACAAGAACTACTGTCTCAAGC
TGCGGCCATTGCCGGTATGTCTAGCATTAACTCATTTGTGCTTAGTGCGGCTGTAGAAAAAGCAAAAACTATTATGGAAC
GTGAACGAGCCCTACAACTAAGCCAGCAAGATGCTATGACGTTAATGACTGCGTTAGACCAACCAGCTAAACCAAATAAC
AAATTACAAAAAGCCGCTTCACGTTATATGGATAAAACTCAAGAATGA

Upstream 100 bases:

>100_bases
AACCGTATTAATGCGATTATTAACCGCGTGCCAAAGTGACACAACACTTGTCAGCGCATAATAATTAAACTACAATTCAC
TTGTGCCACTTTGACACTGA

Downstream 100 bases:

>100_bases
ATACTGTCCAATTAGAAAAAGCTAAACATGACCGAAACCGTTTTGATTGTGGCATTACCGCACTCAATAATTACTTAAAA
GTTATGGCAAGCCAACAAGC

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQLSQQDAMTLMTALDQPAKPNN
KLQKAASRYMDKTQE

Sequences:

>Translated_95_residues
MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQLSQQDAMTLMTALDQPAKPNN
KLQKAASRYMDKTQE
>Mature_95_residues
MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQLSQQDAMTLMTALDQPAKPNN
KLQKAASRYMDKTQE

Specific function: Unknown

COG id: COG4453

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10425; Mature: 10425

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQL
CCHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQQDAMTLMTALDQPAKPNNKLQKAASRYMDKTQE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEIIMATALPRITARVDIDTQELLSQAAAIAGMSSINSFVLSAAVEKAKTIMERERALQL
CCHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQQDAMTLMTALDQPAKPNNKLQKAASRYMDKTQE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA