Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695070

Identifier: 209695070

GI number: 209695070

Start: 1678533

End: 1679018

Strand: Direct

Name: 209695070

Synonym: VSAL_I1567

Alternate gene names: NA

Gene position: 1678533-1679018 (Clockwise)

Preceding gene: 209695069

Following gene: 209695071

Centisome position: 50.48

GC content: 36.21

Gene sequence:

>486_bases
ATGACTCAACCTCAACCTTGGTATAAGCAGTTTTGGCCTTGGTTTCTCATCATTCTTCCAGGCACCGTTGTCGTTGCTTG
TATCACTACTTTCGTCCTTTTTGTTCACAATGATGTCGATTTAGTTGCTGAAGATTATTATAAAAAAGGCAAAGCAATTA
ACGTTGATCTTTCTAAGATAAAAGTCGCTCAAAACCTCTCGATTTTCGCTAAAGTACGCGATCTTGGTGATACAATTGAA
ATTCAATTAGATAAAGGAAAATTGGAACATAACCCTGCTATTAAAGCTATTTTTACTCATAGAACATTACCAGATCGAGA
TTTCTCAAAAATACTCACATCTGATGCAAAAAGCATTTATCGCATTCAATTAGATGAACCATTAACGGGTCCCTGGTTTA
TTGAACTATTACCACACGATAGTTCGTGGATGATCCAAGGTCGCATCAATTTCCCTACCGTAGACTTTTTTCCTTTAGGT
AAATAA

Upstream 100 bases:

>100_bases
CGTCTGGAGCCTAAGCAACAATAAATAAAAAGGCAGCCCCTGAATGTATATATTCAGGGGCTTTTTATTTTTTAATACAC
GCTTTAATAGGAATCATTAT

Downstream 100 bases:

>100_bases
AACCATATGTCAAAGGATTGTTACCATTGCAATGAGCCTGTTCCTATAGGCTCTTCTTTTCAAGTTGATATATTAGGTCA
AAAGCGAGATATGTGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTQPQPWYKQFWPWFLIILPGTVVVACITTFVLFVHNDVDLVAEDYYKKGKAINVDLSKIKVAQNLSIFAKVRDLGDTIE
IQLDKGKLEHNPAIKAIFTHRTLPDRDFSKILTSDAKSIYRIQLDEPLTGPWFIELLPHDSSWMIQGRINFPTVDFFPLG
K

Sequences:

>Translated_161_residues
MTQPQPWYKQFWPWFLIILPGTVVVACITTFVLFVHNDVDLVAEDYYKKGKAINVDLSKIKVAQNLSIFAKVRDLGDTIE
IQLDKGKLEHNPAIKAIFTHRTLPDRDFSKILTSDAKSIYRIQLDEPLTGPWFIELLPHDSSWMIQGRINFPTVDFFPLG
K
>Mature_160_residues
TQPQPWYKQFWPWFLIILPGTVVVACITTFVLFVHNDVDLVAEDYYKKGKAINVDLSKIKVAQNLSIFAKVRDLGDTIEI
QLDKGKLEHNPAIKAIFTHRTLPDRDFSKILTSDAKSIYRIQLDEPLTGPWFIELLPHDSSWMIQGRINFPTVDFFPLGK

Specific function: Unknown

COG id: COG3198

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18560; Mature: 18429

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPQPWYKQFWPWFLIILPGTVVVACITTFVLFVHNDVDLVAEDYYKKGKAINVDLSKI
CCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHHH
KVAQNLSIFAKVRDLGDTIEIQLDKGKLEHNPAIKAIFTHRTLPDRDFSKILTSDAKSIY
HHHCCHHHEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEE
RIQLDEPLTGPWFIELLPHDSSWMIQGRINFPTVDFFPLGK
EEEECCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
TQPQPWYKQFWPWFLIILPGTVVVACITTFVLFVHNDVDLVAEDYYKKGKAINVDLSKI
CCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHHH
KVAQNLSIFAKVRDLGDTIEIQLDKGKLEHNPAIKAIFTHRTLPDRDFSKILTSDAKSIY
HHHCCHHHEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEE
RIQLDEPLTGPWFIELLPHDSSWMIQGRINFPTVDFFPLGK
EEEECCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA