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The map label for this gene is ycbW [H]

Identifier: 209695053

GI number: 209695053

Start: 1659678

End: 1660268

Strand: Direct

Name: ycbW [H]

Synonym: VSAL_I1550

Alternate gene names: 209695053

Gene position: 1659678-1660268 (Clockwise)

Preceding gene: 209695052

Following gene: 209695054

Centisome position: 49.91

GC content: 39.26

Gene sequence:

>591_bases
ATGATTGGCTGGCGTAGGGAAACACTCCCATATTTTCAAGAGAGAACTAACATGCTTAAACCCAGTGATACATGGAGTTG
GTATTACGATAATAAAGCACAATCTCTTATGCTTGATTTAGGCATGGATATGGTTTTTTGTGTGAATTTATCTCCCAAAG
TCTTAATCAATAGTGCATTTGATGATTGTAAATTTTCTGTGGATGATGCATCCGCTTATCAGATGTTTGTTGAACACATT
TCTTATCTTCCTCTTTCTGAACCTCGCAAAGTTGAGCTAGCACTCAATTGTGTTGCCGCCAGACGCTTCCATAAGCCCAT
GCTACCTAAGAGTTGGTTCTTTGAAACCCAAGGGGCAGGGTATTACCCAGAAGAAGGTGAAATCGTTTCTCTGAAAAATG
ATTTAGGAGAAGGGCATTTCATTATTGTAGAAAATTATGAGTGTGCAAGTATGTGTATGTTGGTCGATATGGATGCATTT
GCATTAAATCCAACCAAGTACATGGCCTTTTGTGAACCGATTAAAGTCATGAATGATCGCATGGCCAAAATGCAAGTCGT
TAACTCTTCATATTACGCCCTAGTAGGGTAG

Upstream 100 bases:

>100_bases
TTTTTATTCCTAACCTCTTGTAAAATTAACAGTTAATTGCATCAACGTATTTTATGATTTAAAAACGGATTTATTTTTAC
TCATAAAATAGCACTCATTG

Downstream 100 bases:

>100_bases
TTACTCTCCGTTATTTTATCCCCAGATAAAGCTCCCTTTAATACTTCTAATTCCACTATTTCATCCTTCTTATATTGACT
CTTTTTACAAAATTCATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MIGWRRETLPYFQERTNMLKPSDTWSWYYDNKAQSLMLDLGMDMVFCVNLSPKVLINSAFDDCKFSVDDASAYQMFVEHI
SYLPLSEPRKVELALNCVAARRFHKPMLPKSWFFETQGAGYYPEEGEIVSLKNDLGEGHFIIVENYECASMCMLVDMDAF
ALNPTKYMAFCEPIKVMNDRMAKMQVVNSSYYALVG

Sequences:

>Translated_196_residues
MIGWRRETLPYFQERTNMLKPSDTWSWYYDNKAQSLMLDLGMDMVFCVNLSPKVLINSAFDDCKFSVDDASAYQMFVEHI
SYLPLSEPRKVELALNCVAARRFHKPMLPKSWFFETQGAGYYPEEGEIVSLKNDLGEGHFIIVENYECASMCMLVDMDAF
ALNPTKYMAFCEPIKVMNDRMAKMQVVNSSYYALVG
>Mature_196_residues
MIGWRRETLPYFQERTNMLKPSDTWSWYYDNKAQSLMLDLGMDMVFCVNLSPKVLINSAFDDCKFSVDDASAYQMFVEHI
SYLPLSEPRKVELALNCVAARRFHKPMLPKSWFFETQGAGYYPEEGEIVSLKNDLGEGHFIIVENYECASMCMLVDMDAF
ALNPTKYMAFCEPIKVMNDRMAKMQVVNSSYYALVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=173, Percent_Identity=35.8381502890173, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 22639; Mature: 22639

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGWRRETLPYFQERTNMLKPSDTWSWYYDNKAQSLMLDLGMDMVFCVNLSPKVLINSAF
CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHEECCCCEEEEECCCCCEEEECCC
DDCKFSVDDASAYQMFVEHISYLPLSEPRKVELALNCVAARRFHKPMLPKSWFFETQGAG
CCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEECCCCC
YYPEEGEIVSLKNDLGEGHFIIVENYECASMCMLVDMDAFALNPTKYMAFCEPIKVMNDR
CCCCCCCEEEEECCCCCCCEEEEECCCHHHEEEEEECCHHEECCHHHHHHHHHHHHHHHH
MAKMQVVNSSYYALVG
HHHEEEECCCEEEEEC
>Mature Secondary Structure
MIGWRRETLPYFQERTNMLKPSDTWSWYYDNKAQSLMLDLGMDMVFCVNLSPKVLINSAF
CCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHEECCCCEEEEECCCCCEEEECCC
DDCKFSVDDASAYQMFVEHISYLPLSEPRKVELALNCVAARRFHKPMLPKSWFFETQGAG
CCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEECCCCC
YYPEEGEIVSLKNDLGEGHFIIVENYECASMCMLVDMDAFALNPTKYMAFCEPIKVMNDR
CCCCCCCEEEEECCCCCCCEEEEECCCHHHEEEEEECCHHEECCHHHHHHHHHHHHHHHH
MAKMQVVNSSYYALVG
HHHEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]