Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is tfxG [H]

Identifier: 209694984

GI number: 209694984

Start: 1586716

End: 1587504

Strand: Direct

Name: tfxG [H]

Synonym: VSAL_I1471

Alternate gene names: 209694984

Gene position: 1586716-1587504 (Clockwise)

Preceding gene: 209694981

Following gene: 209694985

Centisome position: 47.72

GC content: 41.19

Gene sequence:

>789_bases
ATGGAAGAACTTCAAGGTGGGCGTGAAGGGCGGGTTTTCCGCTCTGAGAATAAGGTTTATCGACCACGTGGTAAGTGGTC
TGAAACCATACATAGTTTGTTGTCACATATTGCCGAAAATGGTTTTAATGCAGCTCCTAAGCCTTACGGTTTTGATGGCA
AAGATAATGAAGTTTTATCTTATGTCGAAGGAGAGGTTTTCAATTATCCGCTAAAAGGCAATATTGCCACGATTGAAGCA
CTGACTTCTGCAGCTAAACTTCTTCGTTTATACCACGATGCATCTAGTCCGTTTCTATCAAATCATTCAGTTGAATCATT
AGAGTGGATGCTTCCCAGTAGAGAACCTATGGAAGTTATCTGTCACGGAGACTACGCGCCATACAATGTTGCATTGGTTG
GATCAGAAACCGTGGGTATTATCGATTTTGATACTGCGCATCCCGCGCCGCGAGTTTGGGATATCGCTTATGCCGTGTAT
TGTTGGGCTCCATTTAAAACCCATGAGTATGATGCAATGGGGGATTTAGGATCTCAGTCTATACGAGCCAAGCAGTTTTG
TGATGTTTATGGTTTGCTTGAAGCTGATCGTTTGGTTTTAGTTAAAGCAATGACAGAGAGAGTTCAAGCGTTGGTTGACC
ATATGCACAATGAAGCAAGTAATGGTAATCAAGCTTTTATCGAAAATATCAAAGACGGTCACCATTTAGCGTATCTAGCA
GATATCCAATATTTGAATGACAATGAGCAGTATATTACCGATGTAGTGGTTGGTAAAAAGTGCTTATAA

Upstream 100 bases:

>100_bases
AATCACCTTGTTGACAGTTATTCAGAAAAAGGCCAGAGAATATTCAATTAAGAATGATAGCTAAATAAGCACAATATAAA
TAATACTCATAAGGATATTC

Downstream 100 bases:

>100_bases
CAACACTTTAAGAGGTTAATTATGATCCCTTTAAATACATCAATTGTGTCAGGCGTGGCATTATCTAAAATTGATGGCGA
AGAAAAAATTCTACTCATGA

Product: antibiotic resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLSYVEGEVFNYPLKGNIATIEA
LTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVICHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVY
CWAPFKTHEYDAMGDLGSQSIRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA
DIQYLNDNEQYITDVVVGKKCL

Sequences:

>Translated_262_residues
MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLSYVEGEVFNYPLKGNIATIEA
LTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVICHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVY
CWAPFKTHEYDAMGDLGSQSIRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA
DIQYLNDNEQYITDVVVGKKCL
>Mature_262_residues
MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLSYVEGEVFNYPLKGNIATIEA
LTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVICHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVY
CWAPFKTHEYDAMGDLGSQSIRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA
DIQYLNDNEQYITDVVVGKKCL

Specific function: Required for TFX resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 29443; Mature: 29443

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLS
CCCCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
YVEGEVFNYPLKGNIATIEALTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVI
HHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEE
CHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVYCWAPFKTHEYDAMGDLGSQS
EECCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCHH
IRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEE
DIQYLNDNEQYITDVVVGKKCL
EEEEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLS
CCCCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
YVEGEVFNYPLKGNIATIEALTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVI
HHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEE
CHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVYCWAPFKTHEYDAMGDLGSQS
EECCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCHH
IRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEE
DIQYLNDNEQYITDVVVGKKCL
EEEEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8509324 [H]