Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is tfxG [H]
Identifier: 209694984
GI number: 209694984
Start: 1586716
End: 1587504
Strand: Direct
Name: tfxG [H]
Synonym: VSAL_I1471
Alternate gene names: 209694984
Gene position: 1586716-1587504 (Clockwise)
Preceding gene: 209694981
Following gene: 209694985
Centisome position: 47.72
GC content: 41.19
Gene sequence:
>789_bases ATGGAAGAACTTCAAGGTGGGCGTGAAGGGCGGGTTTTCCGCTCTGAGAATAAGGTTTATCGACCACGTGGTAAGTGGTC TGAAACCATACATAGTTTGTTGTCACATATTGCCGAAAATGGTTTTAATGCAGCTCCTAAGCCTTACGGTTTTGATGGCA AAGATAATGAAGTTTTATCTTATGTCGAAGGAGAGGTTTTCAATTATCCGCTAAAAGGCAATATTGCCACGATTGAAGCA CTGACTTCTGCAGCTAAACTTCTTCGTTTATACCACGATGCATCTAGTCCGTTTCTATCAAATCATTCAGTTGAATCATT AGAGTGGATGCTTCCCAGTAGAGAACCTATGGAAGTTATCTGTCACGGAGACTACGCGCCATACAATGTTGCATTGGTTG GATCAGAAACCGTGGGTATTATCGATTTTGATACTGCGCATCCCGCGCCGCGAGTTTGGGATATCGCTTATGCCGTGTAT TGTTGGGCTCCATTTAAAACCCATGAGTATGATGCAATGGGGGATTTAGGATCTCAGTCTATACGAGCCAAGCAGTTTTG TGATGTTTATGGTTTGCTTGAAGCTGATCGTTTGGTTTTAGTTAAAGCAATGACAGAGAGAGTTCAAGCGTTGGTTGACC ATATGCACAATGAAGCAAGTAATGGTAATCAAGCTTTTATCGAAAATATCAAAGACGGTCACCATTTAGCGTATCTAGCA GATATCCAATATTTGAATGACAATGAGCAGTATATTACCGATGTAGTGGTTGGTAAAAAGTGCTTATAA
Upstream 100 bases:
>100_bases AATCACCTTGTTGACAGTTATTCAGAAAAAGGCCAGAGAATATTCAATTAAGAATGATAGCTAAATAAGCACAATATAAA TAATACTCATAAGGATATTC
Downstream 100 bases:
>100_bases CAACACTTTAAGAGGTTAATTATGATCCCTTTAAATACATCAATTGTGTCAGGCGTGGCATTATCTAAAATTGATGGCGA AGAAAAAATTCTACTCATGA
Product: antibiotic resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLSYVEGEVFNYPLKGNIATIEA LTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVICHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVY CWAPFKTHEYDAMGDLGSQSIRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA DIQYLNDNEQYITDVVVGKKCL
Sequences:
>Translated_262_residues MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLSYVEGEVFNYPLKGNIATIEA LTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVICHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVY CWAPFKTHEYDAMGDLGSQSIRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA DIQYLNDNEQYITDVVVGKKCL >Mature_262_residues MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLSYVEGEVFNYPLKGNIATIEA LTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVICHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVY CWAPFKTHEYDAMGDLGSQSIRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA DIQYLNDNEQYITDVVVGKKCL
Specific function: Required for TFX resistance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 29443; Mature: 29443
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLS CCCCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH YVEGEVFNYPLKGNIATIEALTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVI HHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEE CHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVYCWAPFKTHEYDAMGDLGSQS EECCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCHH IRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEE DIQYLNDNEQYITDVVVGKKCL EEEEECCCHHHHHHHHHCCCCC >Mature Secondary Structure MEELQGGREGRVFRSENKVYRPRGKWSETIHSLLSHIAENGFNAAPKPYGFDGKDNEVLS CCCCCCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH YVEGEVFNYPLKGNIATIEALTSAAKLLRLYHDASSPFLSNHSVESLEWMLPSREPMEVI HHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEE CHGDYAPYNVALVGSETVGIIDFDTAHPAPRVWDIAYAVYCWAPFKTHEYDAMGDLGSQS EECCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCHH IRAKQFCDVYGLLEADRLVLVKAMTERVQALVDHMHNEASNGNQAFIENIKDGHHLAYLA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEE DIQYLNDNEQYITDVVVGKKCL EEEEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8509324 [H]