Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is kipA [H]
Identifier: 209694957
GI number: 209694957
Start: 1552313
End: 1553269
Strand: Direct
Name: kipA [H]
Synonym: VSAL_I1438
Alternate gene names: 209694957
Gene position: 1552313-1553269 (Clockwise)
Preceding gene: 209694956
Following gene: 209694958
Centisome position: 46.68
GC content: 43.78
Gene sequence:
>957_bases ATGACACTACGAATTCACAGCACAGGGCCATTGGCGCTACTTCAAGACAAGGGTCGATATGGTCACCAATCGGTAGGGGT GACTCCCGGCGGACCAATGGATGAGCATGCGTTTGATTGGGCTAATAAATTAGTAGATAACGATTCAAATGCGACTCAAA TTGAAATCACGTTAGGTCAATTTAGCTGTACGTTTTATGCAGCCACCACAATCGCACTGACCGGTGCGGATATGGGAGCG AAACTCAATGGTGATGCGATCAGTCCTTGGCAAAGTTACGCGATAAATTCAGGTGATAAACTTGAAATGAGCATCGCAAA GTCGGGGCTACGTGCTTATTTAGCGGTAAGTGGTGGGTTTAAAGTTGAAACGATTTTAGGCAGTTCCGCCACGGTAAGTC GTGATGGATTAGGTGGCGATGATGGTAAAGGCAGTGCATTAATCCCAAATCGTTTAATTCGTTATTCGGTTGATGTTTCG CAATTATCTGCGTCTTTTTCTGAGCCGAGATTGCGTAAGCAAGTGCCGAGTCGATTTATTCCGACGTACGATCGCCATAT TAATATCGGAGTGATCCCGAGCTATCAATATAACGATTTTTCGATTGCCGATCGTCAGCGATTTTTTTCGTCAATTTATA CCGTTTCGACCAACATTGATCGCATGGGGTATCGCTTATCTGGTGAACCTATTCATTGTAAGCGTAATAATTTAATTTCT GAAGGCATAGCACTTGGATCAATTCAAATCCCGAGTGATGGCCAACCTATTGTGCTAATGCGTGATCGTCAAACCATCGG GGGATACCCAAAAATAGGGTGCGTAGTGCATGCGGATATTAATCGTTTAGCGCAATGCTTACCGGGTTCAACCGTTCAGT TTTATGAGAAAGAACTCTACAGCGCAGAAGCTGAATTGATGATACAACGTCAATTCTTTACGTCTTATTGCTCTTAA
Upstream 100 bases:
>100_bases TGGGGGCAAAAGTGACTTTCAGACCAATTTCACGGGAAGAATATTTAACGATGGGAGGGGAGCTTCCAGAGGCATTGTTA GTGAAAGAGGGAAGCAAAGT
Downstream 100 bases:
>100_bases ATGAAGTTGCTATGTAAGCGTGCGGGGAACTACACCTAACAAATAAAATTCATTATGCGTATCTTACGATCTTTCATTTA ACGAGAACGTAATTATGCAA
Product: allophanate hydrolase subunit 2
Products: NA
Alternate protein names: Protein kipA [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTLRIHSTGPLALLQDKGRYGHQSVGVTPGGPMDEHAFDWANKLVDNDSNATQIEITLGQFSCTFYAATTIALTGADMGA KLNGDAISPWQSYAINSGDKLEMSIAKSGLRAYLAVSGGFKVETILGSSATVSRDGLGGDDGKGSALIPNRLIRYSVDVS QLSASFSEPRLRKQVPSRFIPTYDRHINIGVIPSYQYNDFSIADRQRFFSSIYTVSTNIDRMGYRLSGEPIHCKRNNLIS EGIALGSIQIPSDGQPIVLMRDRQTIGGYPKIGCVVHADINRLAQCLPGSTVQFYEKELYSAEAELMIQRQFFTSYCS
Sequences:
>Translated_318_residues MTLRIHSTGPLALLQDKGRYGHQSVGVTPGGPMDEHAFDWANKLVDNDSNATQIEITLGQFSCTFYAATTIALTGADMGA KLNGDAISPWQSYAINSGDKLEMSIAKSGLRAYLAVSGGFKVETILGSSATVSRDGLGGDDGKGSALIPNRLIRYSVDVS QLSASFSEPRLRKQVPSRFIPTYDRHINIGVIPSYQYNDFSIADRQRFFSSIYTVSTNIDRMGYRLSGEPIHCKRNNLIS EGIALGSIQIPSDGQPIVLMRDRQTIGGYPKIGCVVHADINRLAQCLPGSTVQFYEKELYSAEAELMIQRQFFTSYCS >Mature_317_residues TLRIHSTGPLALLQDKGRYGHQSVGVTPGGPMDEHAFDWANKLVDNDSNATQIEITLGQFSCTFYAATTIALTGADMGAK LNGDAISPWQSYAINSGDKLEMSIAKSGLRAYLAVSGGFKVETILGSSATVSRDGLGGDDGKGSALIPNRLIRYSVDVSQ LSASFSEPRLRKQVPSRFIPTYDRHINIGVIPSYQYNDFSIADRQRFFSSIYTVSTNIDRMGYRLSGEPIHCKRNNLISE GIALGSIQIPSDGQPIVLMRDRQTIGGYPKIGCVVHADINRLAQCLPGSTVQFYEKELYSAEAELMIQRQFFTSYCS
Specific function: Counteracts the inhibitory action of kipI on sporulation. May bind to kipI, preventing its function as an inhibitor of kinase A [H]
COG id: COG1984
COG function: function code E; Allophanate hydrolase subunit 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786930, Length=316, Percent_Identity=33.5443037974684, Blast_Score=176, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319685, Length=301, Percent_Identity=30.2325581395349, Blast_Score=122, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003778 [H]
Pfam domain/function: PF02626 AHS2 [H]
EC number: NA
Molecular weight: Translated: 34772; Mature: 34641
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRIHSTGPLALLQDKGRYGHQSVGVTPGGPMDEHAFDWANKLVDNDSNATQIEITLGQ CEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEC FSCTFYAATTIALTGADMGAKLNGDAISPWQSYAINSGDKLEMSIAKSGLRAYLAVSGGF EEEEEEEEEEEEEECCCCCCEECCCCCCCHHHHCCCCCCEEEHHHHHCCCEEEEEECCCE KVETILGSSATVSRDGLGGDDGKGSALIPNRLIRYSVDVSQLSASFSEPRLRKQVPSRFI EEEEEECCCCEECCCCCCCCCCCCCEECCCCEEEEECCHHHHHHCCCCCHHHHHCCHHCC PTYDRHINIGVIPSYQYNDFSIADRQRFFSSIYTVSTNIDRMGYRLSGEPIHCKRNNLIS CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEEECCHHHCCEEECCCCEEECCCCHHH EGIALGSIQIPSDGQPIVLMRDRQTIGGYPKIGCVVHADINRLAQCLPGSTVQFYEKELY CCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHH SAEAELMIQRQFFTSYCS CCHHHHHHHHHHHHHHCC >Mature Secondary Structure TLRIHSTGPLALLQDKGRYGHQSVGVTPGGPMDEHAFDWANKLVDNDSNATQIEITLGQ EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEC FSCTFYAATTIALTGADMGAKLNGDAISPWQSYAINSGDKLEMSIAKSGLRAYLAVSGGF EEEEEEEEEEEEEECCCCCCEECCCCCCCHHHHCCCCCCEEEHHHHHCCCEEEEEECCCE KVETILGSSATVSRDGLGGDDGKGSALIPNRLIRYSVDVSQLSASFSEPRLRKQVPSRFI EEEEEECCCCEECCCCCCCCCCCCCEECCCCEEEEECCHHHHHHCCCCCHHHHHCCHHCC PTYDRHINIGVIPSYQYNDFSIADRQRFFSSIYTVSTNIDRMGYRLSGEPIHCKRNNLIS CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEEECCHHHCCEEECCCCEEECCCCHHH EGIALGSIQIPSDGQPIVLMRDRQTIGGYPKIGCVVHADINRLAQCLPGSTVQFYEKELY CCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHH SAEAELMIQRQFFTSYCS CCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 10568751 [H]