Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694928
Identifier: 209694928
GI number: 209694928
Start: 1522197
End: 1522598
Strand: Direct
Name: 209694928
Synonym: VSAL_I1404
Alternate gene names: NA
Gene position: 1522197-1522598 (Clockwise)
Preceding gene: 209694927
Following gene: 209694930
Centisome position: 45.78
GC content: 35.07
Gene sequence:
>402_bases ATGAAAAAACCAATCCAACAAAAAATAGGCAGTGTTGCACTCGTTGTTGAAAATTACGATGATGCGATTGAATTTTATAC CCATAAATTAAATTTTGAATTAATTGAAGACACTGATCTAGGCGATGGAAAACGTTGGATATTAATTAGCCCACCTAATA GCAATGGAACGAATTTATTATTAGCGCAAGCGAGTAATGAAGAGCAACAGAAATCGGTCGGTAACCAAACAGGTGGTCGT GTATTCCTATTCTTACATACGAATGACTTTTGGCGTGATTACGAAGACATGAAGAAAAAAGGCGTGGTATTTAATGAAGA ACCACGTAAAGAAGTCTATGGTACCGTTGTTGTTTTTCAAGATCTTTATGGCACAAAATGGGATTTATTAGAGCTAAAAT AA
Upstream 100 bases:
>100_bases GTGAAGGGACTGTATTTACGATTTATCTACCAACCAAATCAGAACATTATCCATATGATAATTTGATCGGTTAACCATAC TATGTTTAAAAGAGAGAATA
Downstream 100 bases:
>100_bases TCGATATTATTTGTCTTTATGCTTGGTTTTGAAAAGACCGTGGCTTATTGATTCAGTGAAGAATCAGTAAGCCAATGTCT TTATTGTACTAATTAACAAT
Product: hypothetical protein
Products: glutathione; methylglyoxal
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKKPIQQKIGSVALVVENYDDAIEFYTHKLNFELIEDTDLGDGKRWILISPPNSNGTNLLLAQASNEEQQKSVGNQTGGR VFLFLHTNDFWRDYEDMKKKGVVFNEEPRKEVYGTVVVFQDLYGTKWDLLELK
Sequences:
>Translated_133_residues MKKPIQQKIGSVALVVENYDDAIEFYTHKLNFELIEDTDLGDGKRWILISPPNSNGTNLLLAQASNEEQQKSVGNQTGGR VFLFLHTNDFWRDYEDMKKKGVVFNEEPRKEVYGTVVVFQDLYGTKWDLLELK >Mature_133_residues MKKPIQQKIGSVALVVENYDDAIEFYTHKLNFELIEDTDLGDGKRWILISPPNSNGTNLLLAQASNEEQQKSVGNQTGGR VFLFLHTNDFWRDYEDMKKKGVVFNEEPRKEVYGTVVVFQDLYGTKWDLLELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywkD [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 4.4.1.5
Molecular weight: Translated: 15358; Mature: 15358
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPIQQKIGSVALVVENYDDAIEFYTHKLNFELIEDTDLGDGKRWILISPPNSNGTNLL CCCHHHHHCCCEEEEEECCCCHHEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCCEEE LAQASNEEQQKSVGNQTGGRVFLFLHTNDFWRDYEDMKKKGVVFNEEPRKEVYGTVVVFQ EEECCCCHHHHHCCCCCCCEEEEEEECCCHHCCHHHHHHCCCEECCCCCHHHHEEEEEEE DLYGTKWDLLELK CCCCCCEEEEEEC >Mature Secondary Structure MKKPIQQKIGSVALVVENYDDAIEFYTHKLNFELIEDTDLGDGKRWILISPPNSNGTNLL CCCHHHHHCCCEEEEEECCCCHHEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCCEEE LAQASNEEQQKSVGNQTGGRVFLFLHTNDFWRDYEDMKKKGVVFNEEPRKEVYGTVVVFQ EEECCCCHHHHHCCCCCCCEEEEEEECCCHHCCHHHHHHCCCEECCCCCHHHHEEEEEEE DLYGTKWDLLELK CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (R)-S-lactoylglutathione
Specific reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]