Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694922
Identifier: 209694922
GI number: 209694922
Start: 1513088
End: 1513318
Strand: Direct
Name: 209694922
Synonym: VSAL_I1396
Alternate gene names: NA
Gene position: 1513088-1513318 (Clockwise)
Preceding gene: 209694921
Following gene: 209694927
Centisome position: 45.5
GC content: 38.53
Gene sequence:
>231_bases ATGCGTATTGAAATGATGATAACAGCGGCTCAACTTCCAAAAGATGGATTGACGCTTATTCACCAAGAAATGGAACGCCG TGTGTGGGAATATTATCCTAATGCACGTATTAGAATAAGAAAAGGGGCGAATAACCACCTTGAGATTTATGCACCAAAAG ACGATAAAAAAGCAGCGAATATCATAGTTGAACAAATGTTTAATGAGGCAGAGGAATGGTTGTATGCCTAA
Upstream 100 bases:
>100_bases TAATCTATGGGGGACTCATTTTTGAAATTTATAGTCTTTACTTTTCTCATTTTAACAAATAGAATTAACTGTATATTCAT ACAGTGTCGAGTAAAAAATT
Downstream 100 bases:
>100_bases TATTTTCTTTAATCAAAAACGAAGTAATTCTGCGGCAATGCCATTGAGGTATGGTGGAGAAAATAAAAAGTGGTCCGAGT ATGTCTATAAGGATGTTAGG
Product: DNA-damage-inducible protein I (DinI)
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MRIEMMITAAQLPKDGLTLIHQEMERRVWEYYPNARIRIRKGANNHLEIYAPKDDKKAANIIVEQMFNEAEEWLYA
Sequences:
>Translated_76_residues MRIEMMITAAQLPKDGLTLIHQEMERRVWEYYPNARIRIRKGANNHLEIYAPKDDKKAANIIVEQMFNEAEEWLYA >Mature_76_residues MRIEMMITAAQLPKDGLTLIHQEMERRVWEYYPNARIRIRKGANNHLEIYAPKDDKKAANIIVEQMFNEAEEWLYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9078; Mature: 9078
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIEMMITAAQLPKDGLTLIHQEMERRVWEYYPNARIRIRKGANNHLEIYAPKDDKKAAN CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHH IIVEQMFNEAEEWLYA HHHHHHHHHHHHHHCC >Mature Secondary Structure MRIEMMITAAQLPKDGLTLIHQEMERRVWEYYPNARIRIRKGANNHLEIYAPKDDKKAAN CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHH IIVEQMFNEAEEWLYA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA