Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694912

Identifier: 209694912

GI number: 209694912

Start: 1502924

End: 1503259

Strand: Direct

Name: 209694912

Synonym: VSAL_I1386

Alternate gene names: NA

Gene position: 1502924-1503259 (Clockwise)

Preceding gene: 209694909

Following gene: 209694914

Centisome position: 45.2

GC content: 38.1

Gene sequence:

>336_bases
ATGGTGATTAATTCAGATGGGTACCATGCGCTAATTGAATACTTGACCGAGCATCTAGCAATCTTTGCTAATCAGCAAGG
GGATACAGGCGAAGAAACAGTAGAAGATATTGTGACTGATCTTGTTGCTTCTAATCTTATGGCGGTATTCCAACAGAATC
CAGAGTTAGATCCTGATGTTCGTTTTACGTTAATGCGTGAAGCCGATGCAGTTGTGGCGGATTTAGGTGAAGTACTTGCA
AGTGCTTGGGTTCAAAAAGCGACGAACGAACAAGTTATGTTTTTAGATGATTATATTGGCTTAATTAAAAATCTTTTTGA
TAGTGCTTTTAAATAA

Upstream 100 bases:

>100_bases
TTGAGCATTATTCTCGAATTTGATAAATTAACCATCAGTGCCTAATTTAATGGGTATATTATGACAATGAACACTTACTA
TTATAAAAAATGGGCAGATT

Downstream 100 bases:

>100_bases
TTAGACAATAAATTAATGAAGCTAAGAGAATTAAGGTAAATACTTATCTATTTTTTCTTAGCTTTTTTATGAAAATTACA
ACACTCGCCTTGCTTGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MVINSDGYHALIEYLTEHLAIFANQQGDTGEETVEDIVTDLVASNLMAVFQQNPELDPDVRFTLMREADAVVADLGEVLA
SAWVQKATNEQVMFLDDYIGLIKNLFDSAFK

Sequences:

>Translated_111_residues
MVINSDGYHALIEYLTEHLAIFANQQGDTGEETVEDIVTDLVASNLMAVFQQNPELDPDVRFTLMREADAVVADLGEVLA
SAWVQKATNEQVMFLDDYIGLIKNLFDSAFK
>Mature_111_residues
MVINSDGYHALIEYLTEHLAIFANQQGDTGEETVEDIVTDLVASNLMAVFQQNPELDPDVRFTLMREADAVVADLGEVLA
SAWVQKATNEQVMFLDDYIGLIKNLFDSAFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12369; Mature: 12369

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINSDGYHALIEYLTEHLAIFANQQGDTGEETVEDIVTDLVASNLMAVFQQNPELDPDV
CEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
RFTLMREADAVVADLGEVLASAWVQKATNEQVMFLDDYIGLIKNLFDSAFK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVINSDGYHALIEYLTEHLAIFANQQGDTGEETVEDIVTDLVASNLMAVFQQNPELDPDV
CEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
RFTLMREADAVVADLGEVLASAWVQKATNEQVMFLDDYIGLIKNLFDSAFK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA