Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is yfiL [C]
Identifier: 209694869
GI number: 209694869
Start: 1456036
End: 1456395
Strand: Direct
Name: yfiL [C]
Synonym: VSAL_I1340
Alternate gene names: 209694869
Gene position: 1456036-1456395 (Clockwise)
Preceding gene: 209694868
Following gene: 209694870
Centisome position: 43.79
GC content: 38.61
Gene sequence:
>360_bases ATGAAAAGGTTAGTTGTTCTTGCGATCACGTTAATGATAGCGGCTTGTTCATCAACGCCAGTTCCAACATCTATGATGGA TAAGGATTGGAAAGATTTTGGGTATGAACGAGCTCTAAAAGGTTTGGTCATTCAATCAGAATCTATACTGGTCAAAAAAC TGGATGGTGAAACGCTTAAAGATACAAATTACCAATCCTATCTTGCCGGATATAAAGAAGGGCAAGCTGAATATTGTCAG AAAGATGCTTATATATTAGGCGTGAAAGGCGAATCTTATAATGGTATCTGTGATGTGATAGATTGGACATTTAGGGAAGA TTACAGTAGCGGTAGACATTCGACTGCTGGTGGGATGTAA
Upstream 100 bases:
>100_bases ATCCAGAATTCAGGTTAATTAGTCAAATTTTATAGCAGAAATGATCTGACCTGATACAGTTAACGTAGTACTTAATGTGT TTTCTTTGAGGGTCATGATT
Downstream 100 bases:
>100_bases CTGTAAAGTTTCTATTAGTAAGTATATTTATAATAAGAGGGTACTGATATGAGAGCGTTATTGATTACTGTGTTTGCTCT TTCGTTGATGGCTTGTTCAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQ KDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM
Sequences:
>Translated_119_residues MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQ KDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM >Mature_119_residues MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQ KDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13266; Mature: 13266
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLK CCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCHHHHHHHHEECCCCEEEEECCCCCCC DTNYQSYLAGYKEGQAEYCQKDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM CCCHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLK CCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCHHHHHHHHEECCCCEEEEECCCCCCC DTNYQSYLAGYKEGQAEYCQKDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM CCCHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA