Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yfiL [C]

Identifier: 209694869

GI number: 209694869

Start: 1456036

End: 1456395

Strand: Direct

Name: yfiL [C]

Synonym: VSAL_I1340

Alternate gene names: 209694869

Gene position: 1456036-1456395 (Clockwise)

Preceding gene: 209694868

Following gene: 209694870

Centisome position: 43.79

GC content: 38.61

Gene sequence:

>360_bases
ATGAAAAGGTTAGTTGTTCTTGCGATCACGTTAATGATAGCGGCTTGTTCATCAACGCCAGTTCCAACATCTATGATGGA
TAAGGATTGGAAAGATTTTGGGTATGAACGAGCTCTAAAAGGTTTGGTCATTCAATCAGAATCTATACTGGTCAAAAAAC
TGGATGGTGAAACGCTTAAAGATACAAATTACCAATCCTATCTTGCCGGATATAAAGAAGGGCAAGCTGAATATTGTCAG
AAAGATGCTTATATATTAGGCGTGAAAGGCGAATCTTATAATGGTATCTGTGATGTGATAGATTGGACATTTAGGGAAGA
TTACAGTAGCGGTAGACATTCGACTGCTGGTGGGATGTAA

Upstream 100 bases:

>100_bases
ATCCAGAATTCAGGTTAATTAGTCAAATTTTATAGCAGAAATGATCTGACCTGATACAGTTAACGTAGTACTTAATGTGT
TTTCTTTGAGGGTCATGATT

Downstream 100 bases:

>100_bases
CTGTAAAGTTTCTATTAGTAAGTATATTTATAATAAGAGGGTACTGATATGAGAGCGTTATTGATTACTGTGTTTGCTCT
TTCGTTGATGGCTTGTTCAA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQ
KDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM

Sequences:

>Translated_119_residues
MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQ
KDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM
>Mature_119_residues
MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQ
KDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13266; Mature: 13266

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLK
CCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCHHHHHHHHEECCCCEEEEECCCCCCC
DTNYQSYLAGYKEGQAEYCQKDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM
CCCHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQSESILVKKLDGETLK
CCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCHHHHHHHHEECCCCEEEEECCCCCCC
DTNYQSYLAGYKEGQAEYCQKDAYILGVKGESYNGICDVIDWTFREDYSSGRHSTAGGM
CCCHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA