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The map label for this gene is fdx [H]

Identifier: 209694311

GI number: 209694311

Start: 806794

End: 807132

Strand: Direct

Name: fdx [H]

Synonym: VSAL_I0722

Alternate gene names: 209694311

Gene position: 806794-807132 (Clockwise)

Preceding gene: 209694310

Following gene: 209694312

Centisome position: 24.26

GC content: 38.94

Gene sequence:

>339_bases
ATGCCAAAGATAATTGTTCTACCACACAGTGAATTATGTCCTGACGGCGCAGTGCTTGAAGCGAATGAAGGCGATACCGT
TTTAGATGTTGCATTAAAAAATGGTATTGCTATTGAGCATGCATGTGAAAAATCATGTGCCTGTACAACGTGCCACATTG
TTATTCGTGAAGGGTTTGATTCATTAGAAGAAAGTGATGAGCTTGAAGATGACATGCTAGATAAAGCATGGGGTCTAGAG
CCTGAATCTCGTTTAGGTTGCCAAGCAAGAATGGCAAAACAAGATTTAGTGGTAGAAATTCCAAAATATACACTAAACTT
AGCATCAGAAGAGCATTAA

Upstream 100 bases:

>100_bases
TTAAACACGCTGATGAAGCAAGCCAAGAGTTTGCAGCGCGTCGAATGGATGCCTCTATTCGTGCCGCATTAGCTGGTCAA
TCTATTGATGAGGTATAGAA

Downstream 100 bases:

>100_bases
TTTTAACGAATTAATTAGCCTCTTCTAAAAAGGTAAGGGATGAGATGTGAGTAATAGCTTACCCCTCAGAACTTACCTTT
TTTTATATTAGTAAGTTAAT

Product: 2Fe-2S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPKIIVLPHSELCPDGAVLEANEGDTVLDVALKNGIAIEHACEKSCACTTCHIVIREGFDSLEESDELEDDMLDKAWGLE
PESRLGCQARMAKQDLVVEIPKYTLNLASEEH

Sequences:

>Translated_112_residues
MPKIIVLPHSELCPDGAVLEANEGDTVLDVALKNGIAIEHACEKSCACTTCHIVIREGFDSLEESDELEDDMLDKAWGLE
PESRLGCQARMAKQDLVVEIPKYTLNLASEEH
>Mature_111_residues
PKIIVLPHSELCPDGAVLEANEGDTVLDVALKNGIAIEHACEKSCACTTCHIVIREGFDSLEESDELEDDMLDKAWGLEP
ESRLGCQARMAKQDLVVEIPKYTLNLASEEH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=92, Percent_Identity=43.4782608695652, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=77.2727272727273, Blast_Score=185, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17544202, Length=92, Percent_Identity=42.3913043478261, Blast_Score=69, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=97, Percent_Identity=41.2371134020619, Blast_Score=80, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24661503, Length=97, Percent_Identity=42.2680412371134, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12307; Mature: 12176

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIIVLPHSELCPDGAVLEANEGDTVLDVALKNGIAIEHACEKSCACTTCHIVIREGFD
CCEEEECCCCCCCCCCCEEECCCCCEEEEEEHHCCEEEHHHHCCCCCHHHHHHHHHHCHH
SLEESDELEDDMLDKAWGLEPESRLGCQARMAKQDLVVEIPKYTLNLASEEH
HHHHHCCHHHHHHHHHCCCCCCHHCCHHHHHCCCCEEEECCCCEEECCCCCC
>Mature Secondary Structure 
PKIIVLPHSELCPDGAVLEANEGDTVLDVALKNGIAIEHACEKSCACTTCHIVIREGFD
CEEEECCCCCCCCCCCEEECCCCCEEEEEEHHCCEEEHHHHCCCCCHHHHHHHHHHCHH
SLEESDELEDDMLDKAWGLEPESRLGCQARMAKQDLVVEIPKYTLNLASEEH
HHHHHCCHHHHHHHHHCCCCCCHHCCHHHHHCCCCEEEECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]