| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is gshA
Identifier: 209694234
GI number: 209694234
Start: 716044
End: 717609
Strand: Direct
Name: gshA
Synonym: VSAL_I0643
Alternate gene names: 209694234
Gene position: 716044-717609 (Clockwise)
Preceding gene: 209694233
Following gene: 209694235
Centisome position: 21.53
GC content: 38.31
Gene sequence:
>1566_bases TTGACCGAATTTACTAACCGATTACAGAAAGTCGCGTCTAATCCCAAAGCCTTTAAAAATACTGGCCGTGGTATTGAAAG AGAAACACTTCGTTTTACTCTTGATGCTGCACTTTCTTCAAAACCACATCCAGCAGGCGTAGGTTCAGCACTCACTCACA AATACATCACAACGGATTTTGCTGAGTCATTATTAGAATTTATTACGCCGGTATCTCATGATGTTAAAACGGTATTAAAG CAATTAGAAGATGTGCATCATTACACGGTCTCTCATATGGGAGAGGAAAAATTGTGGCCGCTGTCTATGCCATGTTTTGT GAGCAAAGACGATGACATTACTTTAGCGCAGTATGGTAAATCTAATGTTGGTCAATTAAAAACGACTTACCGTGAAGGTT TAAAGCGCCGTTATGGCAGTGTGATGCAGGTCATTTCTGGTGTTCATTTTAACTTTTCTTTTTCGAATGAGTTTTGGGAC GAATTACTGGGTGAGCAAACTGAAAAAGATCGTCAAGATTCGGTATCTGATGCTTATTTTGGGTTGATCCGTAATTACTA CCGCTTTGGGTGGTTGATCCCTTATTTCTTTGGTGCTTCTCCTGCATTGTGTGGTTCTTTTATTCAAGGTCGAGAAACGA CAATGAATTTTGAATCACTAGGTAAAACATTGTATTTACCTTATGCAACATCATTAAGATTAAGCGATCTTGGTTATACA AATGATGCTCAAAGTGATTTAAAAATCAGTTTAAATAGTATCGATGAATATATTGAAGGCTTGAATAAAGCGATTCGCAC TCCATCGGAAGAGTTTGCAAAAATAGGTTTAAAAGAGGGGGATAAACACATCCAATTAAATGCGAATGTGTTGCAGATTG AAAATGAATTGTATGCTCCAATTCGCCCTAAGCGTGTCGCTAAATCAGGTGAAAAGCCTTCAGAAGCATTAGAGCGTTCG GGAATTGAATATATAGAAGTTCGATCTTTAGATGTAAACCCATTTAGCCCTATTGGTGTAGATGAAGATCAAGTTCGATT CTTAGACCTTTTCTTAACATGGTCTGTACTCACTGATTCTGCTCCTATGGATGACAGTGAAATGGCGTGTTGGAAAGACA ATTGGAATAAGATTGTTGAACTGGGACGTAAGCCTGGGTTAGAGCTTCAAATTGGTTGCCAAGGGGAGCGTTTAACTCAG AAAGCATGGGCTGAACGAGTTTTTGATGATCTATTCACAATAGCTAAAAAAATGGATGCAGTTAATGGTGATGATGCATA CCAACAAACTCATCAACGACTAAGTGCGATGATAGAGAATCCAGAGTTAACTATTTCAGGTCGTCTACTTGCTGAAACGA AGAAGGCTGGTGGTATTGGTATTATTGGTTGTAAATTGGCAATACAACATCGCCAAGCGCATTTAGATCATAAATACAGC TTCTATACTAAAGATGAGTTGGATGCAGAGGTAGAGCGTTCTGTTCTGGCTCAGAAAGAAATTGAGGCCAGTGATACAAT GCCTTTTTCAGAGTATTTAGATGATTATTTCAATTATTTGAAATAA
Upstream 100 bases:
>100_bases ATACTAATTACTGCTCTTTTTTTATTATTCAAACACGAGTAAAATTTGCTACTATCCTAGGATAAAGATCTTAGATCTAC CTCAATAGCGAGAATGTATT
Downstream 100 bases:
>100_bases AACAAATATCGTATAACAAGCACTGTTATCCTAAATGAATAGCAGTGCTTTTTTATTGAGTAAAAAATGAATTATAAATT TTCACTAATTATTGTCGCCT
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: Gamma-ECS; GCS; Gamma-glutamylcysteine synthetase
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTEFTNRLQKVASNPKAFKNTGRGIERETLRFTLDAALSSKPHPAGVGSALTHKYITTDFAESLLEFITPVSHDVKTVLK QLEDVHHYTVSHMGEEKLWPLSMPCFVSKDDDITLAQYGKSNVGQLKTTYREGLKRRYGSVMQVISGVHFNFSFSNEFWD ELLGEQTEKDRQDSVSDAYFGLIRNYYRFGWLIPYFFGASPALCGSFIQGRETTMNFESLGKTLYLPYATSLRLSDLGYT NDAQSDLKISLNSIDEYIEGLNKAIRTPSEEFAKIGLKEGDKHIQLNANVLQIENELYAPIRPKRVAKSGEKPSEALERS GIEYIEVRSLDVNPFSPIGVDEDQVRFLDLFLTWSVLTDSAPMDDSEMACWKDNWNKIVELGRKPGLELQIGCQGERLTQ KAWAERVFDDLFTIAKKMDAVNGDDAYQQTHQRLSAMIENPELTISGRLLAETKKAGGIGIIGCKLAIQHRQAHLDHKYS FYTKDELDAEVERSVLAQKEIEASDTMPFSEYLDDYFNYLK
Sequences:
>Translated_521_residues MTEFTNRLQKVASNPKAFKNTGRGIERETLRFTLDAALSSKPHPAGVGSALTHKYITTDFAESLLEFITPVSHDVKTVLK QLEDVHHYTVSHMGEEKLWPLSMPCFVSKDDDITLAQYGKSNVGQLKTTYREGLKRRYGSVMQVISGVHFNFSFSNEFWD ELLGEQTEKDRQDSVSDAYFGLIRNYYRFGWLIPYFFGASPALCGSFIQGRETTMNFESLGKTLYLPYATSLRLSDLGYT NDAQSDLKISLNSIDEYIEGLNKAIRTPSEEFAKIGLKEGDKHIQLNANVLQIENELYAPIRPKRVAKSGEKPSEALERS GIEYIEVRSLDVNPFSPIGVDEDQVRFLDLFLTWSVLTDSAPMDDSEMACWKDNWNKIVELGRKPGLELQIGCQGERLTQ KAWAERVFDDLFTIAKKMDAVNGDDAYQQTHQRLSAMIENPELTISGRLLAETKKAGGIGIIGCKLAIQHRQAHLDHKYS FYTKDELDAEVERSVLAQKEIEASDTMPFSEYLDDYFNYLK >Mature_520_residues TEFTNRLQKVASNPKAFKNTGRGIERETLRFTLDAALSSKPHPAGVGSALTHKYITTDFAESLLEFITPVSHDVKTVLKQ LEDVHHYTVSHMGEEKLWPLSMPCFVSKDDDITLAQYGKSNVGQLKTTYREGLKRRYGSVMQVISGVHFNFSFSNEFWDE LLGEQTEKDRQDSVSDAYFGLIRNYYRFGWLIPYFFGASPALCGSFIQGRETTMNFESLGKTLYLPYATSLRLSDLGYTN DAQSDLKISLNSIDEYIEGLNKAIRTPSEEFAKIGLKEGDKHIQLNANVLQIENELYAPIRPKRVAKSGEKPSEALERSG IEYIEVRSLDVNPFSPIGVDEDQVRFLDLFLTWSVLTDSAPMDDSEMACWKDNWNKIVELGRKPGLELQIGCQGERLTQK AWAERVFDDLFTIAKKMDAVNGDDAYQQTHQRLSAMIENPELTISGRLLAETKKAGGIGIIGCKLAIQHRQAHLDHKYSF YTKDELDAEVERSVLAQKEIEASDTMPFSEYLDDYFNYLK
Specific function: Glutathione biosynthesis; first step. [C]
COG id: COG2918
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1789044, Length=517, Percent_Identity=52.6112185686654, Blast_Score=573, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSH1_ALISL (B6EGB3)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002262162.1 - GeneID: 6986581 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I0643 - HOGENOM: HBG289023 - OMA: FGLIRNY - ProtClustDB: PRK02107 - HAMAP: MF_00578 - InterPro: IPR007370 - InterPro: IPR006334 - TIGRFAMs: TIGR01434
Pfam domain/function: PF04262 Glu_cys_ligase
EC number: =6.3.2.2
Molecular weight: Translated: 59104; Mature: 58973
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFTNRLQKVASNPKAFKNTGRGIERETLRFTLDAALSSKPHPAGVGSALTHKYITTDF CCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHHH AESLLEFITPVSHDVKTVLKQLEDVHHYTVSHMGEEKLWPLSMPCFVSKDDDITLAQYGK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEHHHCCC SNVGQLKTTYREGLKRRYGSVMQVISGVHFNFSFSNEFWDELLGEQTEKDRQDSVSDAYF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHH GLIRNYYRFGWLIPYFFGASPALCGSFIQGRETTMNFESLGKTLYLPYATSLRLSDLGYT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCEEECCCCCC NDAQSDLKISLNSIDEYIEGLNKAIRTPSEEFAKIGLKEGDKHIQLNANVLQIENELYAP CCCCCHHEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCEEEEECCHHCCC IRPKRVAKSGEKPSEALERSGIEYIEVRSLDVNPFSPIGVDEDQVRFLDLFLTWSVLTDS CCHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC APMDDSEMACWKDNWNKIVELGRKPGLELQIGCQGERLTQKAWAERVFDDLFTIAKKMDA CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC VNGDDAYQQTHQRLSAMIENPELTISGRLLAETKKAGGIGIIGCKLAIQHRQAHLDHKYS CCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEE FYTKDELDAEVERSVLAQKEIEASDTMPFSEYLDDYFNYLK ECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TEFTNRLQKVASNPKAFKNTGRGIERETLRFTLDAALSSKPHPAGVGSALTHKYITTDF CHHHHHHHHHHCCCHHHHHCCCCCCHHHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHHH AESLLEFITPVSHDVKTVLKQLEDVHHYTVSHMGEEKLWPLSMPCFVSKDDDITLAQYGK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEHHHCCC SNVGQLKTTYREGLKRRYGSVMQVISGVHFNFSFSNEFWDELLGEQTEKDRQDSVSDAYF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHH GLIRNYYRFGWLIPYFFGASPALCGSFIQGRETTMNFESLGKTLYLPYATSLRLSDLGYT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCEEECCCCCC NDAQSDLKISLNSIDEYIEGLNKAIRTPSEEFAKIGLKEGDKHIQLNANVLQIENELYAP CCCCCHHEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCEEEEECCHHCCC IRPKRVAKSGEKPSEALERSGIEYIEVRSLDVNPFSPIGVDEDQVRFLDLFLTWSVLTDS CCHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC APMDDSEMACWKDNWNKIVELGRKPGLELQIGCQGERLTQKAWAERVFDDLFTIAKKMDA CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC VNGDDAYQQTHQRLSAMIENPELTISGRLLAETKKAGGIGIIGCKLAIQHRQAHLDHKYS CCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEE FYTKDELDAEVERSVLAQKEIEASDTMPFSEYLDDYFNYLK ECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA