| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yhbS [H]
Identifier: 209694200
GI number: 209694200
Start: 673032
End: 673535
Strand: Direct
Name: yhbS [H]
Synonym: VSAL_I0608
Alternate gene names: 209694200
Gene position: 673032-673535 (Clockwise)
Preceding gene: 209694199
Following gene: 209694201
Centisome position: 20.24
GC content: 39.29
Gene sequence:
>504_bases ATGCTTATTAGAACTGAAGCACCCGCTGATATTCTTACTATTGATCTATTAGTAAAATCAGTTTTTGATACTACTGCTGA AGCTAAACTTGTGATGTCTTTACGTGAAAACAGTCACTTAACCTTATCATTGGTTGCTTGTAATGATGACGGAGAGTTGA TTGGTCATTGTTTATTTAGCCCTGTGACGATTAATGGTGAAGACATCGCTTGGCAAGGATTAGCGCCACTGTGTGTTAAA AAAGAATATCAAAAGCAAGGTGTTGCGACGGCAATGATGAAAGAAGCGTTTGAAACACTAACAGAACTTGGTTATCCGGT GTGTGTCGTTTTAGGCGATCCGGCTTATTATCAGCGTTTTGGTTTTGAAGCGGCTGAAAAATATAACATGTCATGCCAAT GGGAAGTGCCAGAAGGTGCTTTTATGGTAAAAGCGTGTGATGCTGAGTTTTTAGCCGATCGTTCAGGCTTAATTGAATAT TGCCCTGAATTTAACGATTTGTAG
Upstream 100 bases:
>100_bases GATCTTGATTCACTGCCTAAACCTTTAAACCAAGCATTAATGACTTTGGCAAATTTTGTACAACAAGGTTTGCAAAAGAT TGAAGTAAAAGAGAGCCTTA
Downstream 100 bases:
>100_bases AAAGTAGATGCTCTCTATTTATGTTAAAAATAACATAGAGAGCATTAATGGTTTATGAAATACTAACTAAGAAACCTAGG GTGAGTACTGATAATAAAGA
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLIRTEAPADILTIDLLVKSVFDTTAEAKLVMSLRENSHLTLSLVACNDDGELIGHCLFSPVTINGEDIAWQGLAPLCVK KEYQKQGVATAMMKEAFETLTELGYPVCVVLGDPAYYQRFGFEAAEKYNMSCQWEVPEGAFMVKACDAEFLADRSGLIEY CPEFNDL
Sequences:
>Translated_167_residues MLIRTEAPADILTIDLLVKSVFDTTAEAKLVMSLRENSHLTLSLVACNDDGELIGHCLFSPVTINGEDIAWQGLAPLCVK KEYQKQGVATAMMKEAFETLTELGYPVCVVLGDPAYYQRFGFEAAEKYNMSCQWEVPEGAFMVKACDAEFLADRSGLIEY CPEFNDL >Mature_167_residues MLIRTEAPADILTIDLLVKSVFDTTAEAKLVMSLRENSHLTLSLVACNDDGELIGHCLFSPVTINGEDIAWQGLAPLCVK KEYQKQGVATAMMKEAFETLTELGYPVCVVLGDPAYYQRFGFEAAEKYNMSCQWEVPEGAFMVKACDAEFLADRSGLIEY CPEFNDL
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789546, Length=165, Percent_Identity=47.2727272727273, Blast_Score=166, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18518; Mature: 18518
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRTEAPADILTIDLLVKSVFDTTAEAKLVMSLRENSHLTLSLVACNDDGELIGHCLFS CEECCCCCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCCEEEEEEEECCCCHHHHHHHCC PVTINGEDIAWQGLAPLCVKKEYQKQGVATAMMKEAFETLTELGYPVCVVLGDPAYYQRF CEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH GFEAAEKYNMSCQWEVPEGAFMVKACDAEFLADRSGLIEYCPEFNDL CCHHHHHCCCEEEEECCCCEEEEEECCHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure MLIRTEAPADILTIDLLVKSVFDTTAEAKLVMSLRENSHLTLSLVACNDDGELIGHCLFS CEECCCCCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCCEEEEEEEECCCCHHHHHHHCC PVTINGEDIAWQGLAPLCVKKEYQKQGVATAMMKEAFETLTELGYPVCVVLGDPAYYQRF CEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH GFEAAEKYNMSCQWEVPEGAFMVKACDAEFLADRSGLIEYCPEFNDL CCHHHHHCCCEEEEECCCCEEEEEECCHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]