Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694123
Identifier: 209694123
GI number: 209694123
Start: 586622
End: 586879
Strand: Reverse
Name: 209694123
Synonym: VSAL_I0530
Alternate gene names: NA
Gene position: 586879-586622 (Counterclockwise)
Preceding gene: 209694124
Following gene: 209694122
Centisome position: 17.65
GC content: 34.11
Gene sequence:
>258_bases ATGAACCCAATTATCCAAACACTAAAAGAACACAATGTTAGCGATGAAAAAATCACAGAAGTATTTCAAGCGCTAACACA AAATCCATTAGCGGCAATGGCAACCATTCAAAGCTTAGGTATTCCACAAGAAAAACTACAACCATTAATGATGATGGTAA TGACAAACCCTAGCTTAATTAAAGAAGCGGTTGAAGAATTAGGTTTGGATTTTTCAAAAGTAGAAGAAGCAAAAGCGAAG CTTGAAGAGAATAAATAA
Upstream 100 bases:
>100_bases GATTCTAGGCAGCCATTATTTATAGTAATTAGTTTTATGACTTTATGTTTGAACCAGTAAACTCAAACATAAAACATCCA TTTAAATGAGGATCGTTCTA
Downstream 100 bases:
>100_bases TCGTTTTCTACAAACATTAAAGCCCTGACTTCGGTCGGGGCTTTTTATATCTACAGAACTATTGAGTATTTTTCTATATC GCAGATACTTTCCATATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEKLQPLMMMVMTNPSLIKEAVEELGLDFSKVEEAKAK LEENK
Sequences:
>Translated_85_residues MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEKLQPLMMMVMTNPSLIKEAVEELGLDFSKVEEAKAK LEENK >Mature_85_residues MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEKLQPLMMMVMTNPSLIKEAVEELGLDFSKVEEAKAK LEENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9509; Mature: 9509
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEKLQPLMMMVMTNPSLI CCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH KEAVEELGLDFSKVEEAKAKLEENK HHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEKLQPLMMMVMTNPSLI CCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH KEAVEELGLDFSKVEEAKAKLEENK HHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA