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The map label for this gene is insO2 [H]

Identifier: 209694040

GI number: 209694040

Start: 488524

End: 489393

Strand: Direct

Name: insO2 [H]

Synonym: VSAL_I0440

Alternate gene names: 209694040

Gene position: 488524-489393 (Clockwise)

Preceding gene: 209694039

Following gene: 209694042

Centisome position: 14.69

GC content: 38.85

Gene sequence:

>870_bases
TTAATCGAAAAACTCAAGCAGAGCTATAGTATTAGCATTATTTGTAAAGTATTCGATATCCATCGAAGTAGTTATAAATA
TTGGCGAGAGCACCTTAAGGAGATGATCGCAGAGCAGGTCATATTACGGAGTGAGGTTCGAGCTGCGCATACTGCAAGGA
ATGGCTCCGCCGGGGCAAGAAGCATTGCCGATATTCTGACAAACAAAGGGATTAAACTGAGTCGCTATCGTGCATCTAAG
TTAATGAAAGAATTAGAGATAGTCAGTTGCCAAATACCAAAGCATAAATACAATAATGAAGTGAAAGAGCACATTGAGAT
ACCAAACAAACTTAACCGAAAATTTGCAGCTACTGCACCAAACAAAGTTTGGTGTGGTGATGTAACTTATATTTGGATAG
GCTCTCGATGGGCTTATTTAGCCATCGTAATGGATTTATTCTCTCGTAAACCGATTGGATGGGCGATGTCATTATCACCT
GATAGTACATTGACAGGTAAAGCATTGAGCATGGCCTTTGAATCAAGAGGAAGACCGAAAAATGTGATGTTTCATTCAGA
TCAAGGTTGTCATTATACTAGCCGACAATTTAGGCAATTATTATGGCGGTATCAAATAGACCAAAGTTTATCTCGTAGAG
GAAACTGCTGGGATAATAGTCCAATGGAGCGCTTCTTTCGAAGCTTAAAAAGTGAGTGGATATCGAAAGTCGGATATCGT
AATGTTGTGGAAGCAAAAATAAATATAATTAATTACATTACAAGTTATTACAGTACAGTCAGGCCGCATCAATATAACGG
AGGACTAACACCTAATGAATCAGAACGGATCTTCTGGTTAAACTCTAAAGCCGTGGCCAGTTTTACTTGA

Upstream 100 bases:

>100_bases
TTCGGGAATTGAAAAAGAAATTAGCTCGTTTAGAAGAGCATAATTCAATACTAAAAAAGGCTACGGCTCTGTTGATGTCA
GACTCCTTGAACAATTCGCA

Downstream 100 bases:

>100_bases
CCACTTCAATTTCCTTGTTGAAGGTGTTATTTATCTTTCCAGACACAACCTTAATTAAGACTATTATCTATAGTTTAAAT
CAGTTGTTAACTGAATTTTA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIEKLKQSYSISIICKVFDIHRSSYKYWREHLKEMIAEQVILRSEVRAAHTARNGSAGARSIADILTNKGIKLSRYRASK
LMKELEIVSCQIPKHKYNNEVKEHIEIPNKLNRKFAATAPNKVWCGDVTYIWIGSRWAYLAIVMDLFSRKPIGWAMSLSP
DSTLTGKALSMAFESRGRPKNVMFHSDQGCHYTSRQFRQLLWRYQIDQSLSRRGNCWDNSPMERFFRSLKSEWISKVGYR
NVVEAKINIINYITSYYSTVRPHQYNGGLTPNESERIFWLNSKAVASFT

Sequences:

>Translated_289_residues
LIEKLKQSYSISIICKVFDIHRSSYKYWREHLKEMIAEQVILRSEVRAAHTARNGSAGARSIADILTNKGIKLSRYRASK
LMKELEIVSCQIPKHKYNNEVKEHIEIPNKLNRKFAATAPNKVWCGDVTYIWIGSRWAYLAIVMDLFSRKPIGWAMSLSP
DSTLTGKALSMAFESRGRPKNVMFHSDQGCHYTSRQFRQLLWRYQIDQSLSRRGNCWDNSPMERFFRSLKSEWISKVGYR
NVVEAKINIINYITSYYSTVRPHQYNGGLTPNESERIFWLNSKAVASFT
>Mature_289_residues
LIEKLKQSYSISIICKVFDIHRSSYKYWREHLKEMIAEQVILRSEVRAAHTARNGSAGARSIADILTNKGIKLSRYRASK
LMKELEIVSCQIPKHKYNNEVKEHIEIPNKLNRKFAATAPNKVWCGDVTYIWIGSRWAYLAIVMDLFSRKPIGWAMSLSP
DSTLTGKALSMAFESRGRPKNVMFHSDQGCHYTSRQFRQLLWRYQIDQSLSRRGNCWDNSPMERFFRSLKSEWISKVGYR
NVVEAKINIINYITSYYSTVRPHQYNGGLTPNESERIFWLNSKAVASFT

Specific function: Involved in the transposition of the insertion sequence IS911B [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=242, Percent_Identity=30.5785123966942, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788405, Length=281, Percent_Identity=32.0284697508897, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1787263, Length=281, Percent_Identity=32.0284697508897, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786753, Length=281, Percent_Identity=32.0284697508897, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786570, Length=281, Percent_Identity=32.0284697508897, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786490, Length=281, Percent_Identity=32.0284697508897, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1789981, Length=277, Percent_Identity=30.6859205776173, Blast_Score=128, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33617; Mature: 33617

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LIEKLKQSYSISIICKVFDIHRSSYKYWREHLKEMIAEQVILRSEVRAAHTARNGSAGAR
CCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SIADILTNKGIKLSRYRASKLMKELEIVSCQIPKHKYNNEVKEHIEIPNKLNRKFAATAP
HHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHCCCEECCCC
NKVWCGDVTYIWIGSRWAYLAIVMDLFSRKPIGWAMSLSPDSTLTGKALSMAFESRGRPK
CCEEECCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCC
NVMFHSDQGCHYTSRQFRQLLWRYQIDQSLSRRGNCWDNSPMERFFRSLKSEWISKVGYR
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
NVVEAKINIINYITSYYSTVRPHQYNGGLTPNESERIFWLNSKAVASFT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]