Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694036

Identifier: 209694036

GI number: 209694036

Start: 484735

End: 485046

Strand: Direct

Name: 209694036

Synonym: VSAL_I0435

Alternate gene names: NA

Gene position: 484735-485046 (Clockwise)

Preceding gene: 209694035

Following gene: 209694037

Centisome position: 14.58

GC content: 38.14

Gene sequence:

>312_bases
ATGCAAAAAGATAAAAAGAGAACACCAGAGCAATGGCACGCTCTATTTGAATCTCAGCAATCTAGCAAGCTTAGTGCCGC
TGAATTTTGTCGTAACCATAATATTCTGCCAAAGACATTTAGTGCACGTAAAGCACGATGGAAACAAAAGATTAACGCTT
CTACTTTCTTGAAAGTAGAAGCGTTAACATCAACTATCATCGCCACTCCACAATTACCAGATATTCAACTTTCTATCGGA
AAATTGCGATTAACATTGCCAGCTACTGAACCTCACTGGATAGGACTCTTATTAAAAGGGTATCAATCATGA

Upstream 100 bases:

>100_bases
GTTCTTGATTTGTTGAAACGTAAGCGTGCGGGGAACTACACCTAACAAATAAAATTCATTATGCGTATCTTACGATCTTT
CATTTAACGAGAACGTAATT

Downstream 100 bases:

>100_bases
ATGTATTTACTGATGTTTCCACCATTTATCTTCATCGTGATTTTGTCGATTTTCGCAAGGCCATTAATGGCCTTGTCGTG
ATTGTTGAGCAAGAAATGCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKARWKQKINASTFLKVEALTSTIIATPQLPDIQLSIG
KLRLTLPATEPHWIGLLLKGYQS

Sequences:

>Translated_103_residues
MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKARWKQKINASTFLKVEALTSTIIATPQLPDIQLSIG
KLRLTLPATEPHWIGLLLKGYQS
>Mature_103_residues
MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKARWKQKINASTFLKVEALTSTIIATPQLPDIQLSIG
KLRLTLPATEPHWIGLLLKGYQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11757; Mature: 11757

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKARWKQKINASTFLKVE
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEHH
ALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS
HHHHHHCCCCCCCCEEEEECEEEEEECCCCCHHHHHEECCCCC
>Mature Secondary Structure
MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKARWKQKINASTFLKVE
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEHH
ALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS
HHHHHHCCCCCCCCEEEEECEEEEEECCCCCHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA