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The map label for this gene is 209693996

Identifier: 209693996

GI number: 209693996

Start: 432244

End: 432810

Strand: Direct

Name: 209693996

Synonym: VSAL_I0394

Alternate gene names: NA

Gene position: 432244-432810 (Clockwise)

Preceding gene: 209693995

Following gene: 209694000

Centisome position: 13.0

GC content: 33.86

Gene sequence:

>567_bases
ATGAAATTCAATAATTTCAGTAATATATTGAATTCATTGATTGAAATGGAACGTACGAATAAATGTGAACTCTTTTATTT
TGATGAGTCAGGCTTTAGTCAGAAATCTAATCTTCCTTATTGTTGGGGACCTATCGGTGTTCAATCGCTAAGGCCTGCTC
ATTCACACAGCAAACGGCTCAATGTTCTTGGCTTCTTAAGTAGACAAGGTAAATTGAGTTTTCAAACAACGGAAGGAAGA
GTAACTACCGATACAGTAATTGATGCATTTGAGCACTTTATCAACGCACGAAAAAACGATAAGCCATGCTTTATTATCTT
AGATAATGCCTCTTTTCATAGGTCAGCAAAATTTAAACAAAAATTGCATGAGTGGTTGATAAATGATGTATTAGTTTGTT
ATCTACCACCGTACTCTCCAGAGCTCAATATCATTGAGATATTGTGGAAGAAAGTAAAATATGAATGGTTACCATGTGAA
GCGTTCAAAACGTTTGAAGACCTCAGTATTAACATCAAAAACATATTAAATTATTACGGCGAAAAATTCACAATAACTTT
TGCGTGA

Upstream 100 bases:

>100_bases
CAGGTAAAAAATCCAGCTTAGACACTATTAAACGAAATATAAAAAAAGTGATTACAGTTACAAAAGAGCCCGACACTCAT
TAAAGTTAAAGCGTGACGAT

Downstream 100 bases:

>100_bases
CTACTTATCAATGCCATCATTATAATCTAACAGCGTGAATACACCATTTAGGGGGTGTTTAGGCGATATTTTCCAATCAG
AAGCTTTGGCATGAGCCCTT

Product: transposase

Products: NA

Alternate protein names: Transposase ISSpnII; LOW QUALITY PROTEIN Protein

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPIGVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGR
VTTDTVIDAFEHFINARKNDKPCFIILDNASFHRSAKFKQKLHEWLINDVLVCYLPPYSPELNIIEILWKKVKYEWLPCE
AFKTFEDLSINIKNILNYYGEKFTITFA

Sequences:

>Translated_188_residues
MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPIGVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGR
VTTDTVIDAFEHFINARKNDKPCFIILDNASFHRSAKFKQKLHEWLINDVLVCYLPPYSPELNIIEILWKKVKYEWLPCE
AFKTFEDLSINIKNILNYYGEKFTITFA
>Mature_188_residues
MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPIGVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGR
VTTDTVIDAFEHFINARKNDKPCFIILDNASFHRSAKFKQKLHEWLINDVLVCYLPPYSPELNIIEILWKKVKYEWLPCE
AFKTFEDLSINIKNILNYYGEKFTITFA

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22049; Mature: 22049

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPIGVQSLRPAHSHSKRL
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHCCCCHHHHHHH
NVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCFIILDNASFHRSAKFKQ
HHEEEECCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH
KLHEWLINDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFKTFEDLSINIKNILNYYG
HHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCEECHHHHHHHCC
EKFTITFA
CEEEEEEC
>Mature Secondary Structure
MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPIGVQSLRPAHSHSKRL
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHCCCCHHHHHHH
NVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCFIILDNASFHRSAKFKQ
HHEEEECCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH
KLHEWLINDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFKTFEDLSINIKNILNYYG
HHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCEECHHHHHHHCC
EKFTITFA
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA