Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is bcsP31 [H]

Identifier: 209693960

GI number: 209693960

Start: 391308

End: 392282

Strand: Reverse

Name: bcsP31 [H]

Synonym: VSAL_I0356

Alternate gene names: 209693960

Gene position: 392282-391308 (Counterclockwise)

Preceding gene: 209693961

Following gene: 209693959

Centisome position: 11.8

GC content: 41.85

Gene sequence:

>975_bases
ATGGCATTGAAAAACTTAATTAAAGTAAGTGCTGTTGCAGCAGCAATGCTTGGTGCTGGCATGGGAACCGCAAGCGCTCA
AGAATTTATTACAATTGGTACTGGTTCTGTCACCGGTGTTTACTACCCAACGGGTGGTGCTATTTGTAAGTTAGTGAATA
AAGATCGTAAAGAGCATAATGTTCGTTGTTCTGTTGAGTCCACTGGTGGTTCAATTTATAACGTAAATACTATCCGTTCT
GGTGAACTTGATTTTGGTATCGTGCAATCAGATTGGCAATACCATGGCTATAACGGCACAAGTAAATTTGAAGCTCAAGG
TCCTTACAAGAAACTACGTGCAATGTTCTCTCTTCATACTGAACCTTTTAACATCATTGCTCGTTCTGATTCCGGTATCA
ACGACGTTTCTGATTTAGCCGGAAAACGCGTTAACATTGGTAATCCAGGCTCTGGCGACCGTGCAACAATGGGTGTTGTG
ATGAATGCGATGGGCTGGACAAACGACAGCTTTAAACTTGCATCGGAACTAAAAAGCTCTGAGCTTTCACAAGCGCTTTG
TGATAATAAAATTGATGCCTTCATCTACATGGTTGGTCATCCAAATGGCTCAATCAAAGAAGCGACAACATCGTGTGATG
CTAAATTAGTTCCTGCTACTGGTCCTAAGATCGATAAGATTGTTGCAGATAACCCTTATTACGCTTACACAACCGTTCCT
GCTAGCATGTACCGTGGAACAGAAGGCGATGTAAATAGCTTTGGTGTTGCGGCTACGGTGGTTACGACATCTGACGTATC
AGATGAAGTGGCTTACAGTGTTGCAAAAGCAGTATTTGAAAACTTTAATACCTTCAAGCGTCTTCACCCTGCGTTTGCTA
CGCTGAAAAAAGAAGACATGGTTAAAGCGGGTATTTCTATTCCATTGCATCCTGGTGCGGTGAAATATTACAAAGAAGTT
GGTCTACTAAAATAG

Upstream 100 bases:

>100_bases
CTTTGAATATGAAGTGAATAAATAATGCGTCTTACTTTCTACGATCTAATATTAAGAACGATGAACAGTAAAGAAGCAAC
ATAATAAGGAAGGGAATAAC

Downstream 100 bases:

>100_bases
TTCCCTTCTATACAACTCAACGTTAATTAAAAAACTGGGTTGTCTAAATCAAAGAGGCTAAATAGTCTCTTTGATTCTTC
GCAACACCATCTGATCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRS
GELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHTEPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVV
MNAMGWTNDSFKLASELKSSELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGPKIDKIVADNPYYAYTTVP
ASMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFENFNTFKRLHPAFATLKKEDMVKAGISIPLHPGAVKYYKEV
GLLK

Sequences:

>Translated_324_residues
MALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRS
GELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHTEPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVV
MNAMGWTNDSFKLASELKSSELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGPKIDKIVADNPYYAYTTVP
ASMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFENFNTFKRLHPAFATLKKEDMVKAGISIPLHPGAVKYYKEV
GLLK
>Mature_323_residues
ALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRSG
ELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHTEPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVVM
NAMGWTNDSFKLASELKSSELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGPKIDKIVADNPYYAYTTVPA
SMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFENFNTFKRLHPAFATLKKEDMVKAGISIPLHPGAVKYYKEVG
LLK

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168
- InterPro:   IPR011852 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 34634; Mature: 34502

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHN
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCC
VRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHT
EEEEEECCCCEEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHCC
EPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVVMNAMGWTNDSFKLASELKSS
CCEEEEEECCCCCCHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGPKIDKIVADNPYYAYTTVP
HHHHHHHCCCCEEEEEEEECCCCCCHHHCCCCCCEEECCCCCCCCEEEECCCEEEEEECC
ASMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFENFNTFKRLHPAFATLKKEDM
HHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKAGISIPLHPGAVKYYKEVGLLK
HHHCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
ALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHN
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCC
VRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHT
EEEEEECCCCEEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHCC
EPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVVMNAMGWTNDSFKLASELKSS
CCEEEEEECCCCCCHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGPKIDKIVADNPYYAYTTVP
HHHHHHHCCCCEEEEEEEECCCCCCHHHCCCCCCEEECCCCCCCCEEEECCCEEEEEECC
ASMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFENFNTFKRLHPAFATLKKEDM
HHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKAGISIPLHPGAVKYYKEVGLLK
HHHCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3133283 [H]