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The map label for this gene is uspF [H]

Identifier: 209693958

GI number: 209693958

Start: 388002

End: 388439

Strand: Reverse

Name: uspF [H]

Synonym: VSAL_I0354

Alternate gene names: 209693958

Gene position: 388439-388002 (Counterclockwise)

Preceding gene: 209693959

Following gene: 209693950

Centisome position: 11.68

GC content: 38.13

Gene sequence:

>438_bases
ATGTATAAACAAATTTTGGTTCCAGTAGATTTAAACGATAAAGGCTTTGCTGATAAAGCGGTTGAAATGGCAGTTTGGCA
CGCAAAACACTCTAATGCTGAATTACATTTGCTTAACGTATTACCGGGGATCCATATGTCGATGGTATCGACCTATTTTC
CTAAAGGTGCTGCGAAACAAATGAAAGAAGATGTATCAAAACAGTTAAATGAATTTGCGGCTAAATTTGTGGATGATGAT
GTGGTATACAGAGTGCATGTTGCCGAAGGGAAACCTTATGTCACTATTTTAGATTATGCTGAACGTTTAGGTGCCGATTT
GATTGTGATGCCAAGCCATAAACGCTCTAAAATTGATAAAGTTATGCTGGGTTCTGTGGCGAGTAAAGTTGTCGAAAACT
CACCAATTAACGTGATGGTTGTCAAACCTCAAGGTTAA

Upstream 100 bases:

>100_bases
TTTAATCAGCGTCGCCGAGCGAAAAAGGAAAACTTGGCCGCATAAATTAATGAATGGAATCTAAGGGGAGAATAACTTCC
CTAATTAGGTAATAAAAATT

Downstream 100 bases:

>100_bases
TCCCCCCTATTTGATACAAAAAAGGAGCCTTTCGGCTCCTTTTTTTATTTTTAAATTCAACTATTGCTTAGGCAGTGTTT
TGTAATCCGGTCTTACTGGA

Product: universal stress protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIHMSMVSTYFPKGAAKQMKEDVSKQLNEFAAKFVDDD
VVYRVHVAEGKPYVTILDYAERLGADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG

Sequences:

>Translated_145_residues
MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIHMSMVSTYFPKGAAKQMKEDVSKQLNEFAAKFVDDD
VVYRVHVAEGKPYVTILDYAERLGADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG
>Mature_145_residues
MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIHMSMVSTYFPKGAAKQMKEDVSKQLNEFAAKFVDDD
VVYRVHVAEGKPYVTILDYAERLGADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=146, Percent_Identity=34.2465753424658, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786824, Length=148, Percent_Identity=31.7567567567568, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16119; Mature: 16119

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIHMSMVSTYFPKGAAKQ
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHH
MKEDVSKQLNEFAAKFVDDDVVYRVHVAEGKPYVTILDYAERLGADLIVMPSHKRSKIDK
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHCCCEEEECCCCHHHHHH
VMLGSVASKVVENSPINVMVVKPQG
HHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIHMSMVSTYFPKGAAKQ
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHH
MKEDVSKQLNEFAAKFVDDDVVYRVHVAEGKPYVTILDYAERLGADLIVMPSHKRSKIDK
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHCCCEEEECCCCHHHHHH
VMLGSVASKVVENSPINVMVVKPQG
HHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]