Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693822

Identifier: 209693822

GI number: 209693822

Start: 250359

End: 250787

Strand: Reverse

Name: 209693822

Synonym: VSAL_I0209

Alternate gene names: NA

Gene position: 250787-250359 (Counterclockwise)

Preceding gene: 209693826

Following gene: 209693820

Centisome position: 7.54

GC content: 41.03

Gene sequence:

>429_bases
ATGCCGTCACATCTACCTAAATCATTCAGTAAACCGTTTTTAAAAATATTTCATATTTTAGAAGCGGTGTTATTAGTTGC
CATCACGCTTGCGACTGTCTTTGCGATGGTGAACGAGTTTGTACACGTATTTTCTGAGCGACAGATCCAGTTAACAGACA
TTCTGTTGATGTTCATTTATCTCGAAGTGTTGGCCATGGTGCAACAATTTGTGATGAACGGTAAAATCCCTGTTCGCTAT
CCTATCTATATTGCGATGATGGCCATTGCTCGTTACATCACTCTAGGCATGAAAGAACTCGATGCGGTCTTGGTTGTGTG
GCTCGCGTTAGCTGCTTTTATTTTAGCAGCAGCAACCTTATTGATCCGAGCTGGGCATTATTATTGGCCGTATGAAACAC
ATGAGAGCAGTAAGAAATATGATGAGTAA

Upstream 100 bases:

>100_bases
AATGAATCAATGAAATACGTAAATTAACGAATAATTTGAAAGAATTAATGCTACGCTTTAGGATTAGGATCCAATTAGAA
TAAAAAAAGAGTAATTTTAA

Downstream 100 bases:

>100_bases
TAACTAACGTATAGCAGAAAAATAAAAAGCCTCGCAGATAGTTATCAACGAGGCCTTTTTAATGGTTAACAATCAAAACT
GATTATTCAATGTTCTGAAT

Product: phosphate-starvation-inducible E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFSERQIQLTDILLMFIYLEVLAMVQQFVMNGKIPVRY
PIYIAMMAIARYITLGMKELDAVLVVWLALAAFILAAATLLIRAGHYYWPYETHESSKKYDE

Sequences:

>Translated_142_residues
MPSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFSERQIQLTDILLMFIYLEVLAMVQQFVMNGKIPVRY
PIYIAMMAIARYITLGMKELDAVLVVWLALAAFILAAATLLIRAGHYYWPYETHESSKKYDE
>Mature_141_residues
PSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFSERQIQLTDILLMFIYLEVLAMVQQFVMNGKIPVRYP
IYIAMMAIARYITLGMKELDAVLVVWLALAAFILAAATLLIRAGHYYWPYETHESSKKYDE

Specific function: Unknown

COG id: COG3223

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16327; Mature: 16196

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFSERQIQLTDILLMFIY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LEVLAMVQQFVMNGKIPVRYPIYIAMMAIARYITLGMKELDAVLVVWLALAAFILAAATL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIRAGHYYWPYETHESSKKYDE
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFSERQIQLTDILLMFIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LEVLAMVQQFVMNGKIPVRYPIYIAMMAIARYITLGMKELDAVLVVWLALAAFILAAATL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIRAGHYYWPYETHESSKKYDE
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA