BacMap

Definition	Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession	NC_011312
Length	3,325,165

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The map label for this gene is rhlB

Identifier: 209693767

GI number: 209693767

Start: 185316

End: 186620

Strand: Reverse

Name: rhlB

Synonym: VSAL_I0146

Alternate gene names: 209693767

Gene position: 186620-185316 (Counterclockwise)

Preceding gene: 209693774

Following gene: 209693753

Centisome position: 5.61

GC content: 43.75

Gene sequence:

>1305_bases
ATGAAAAAGACGCACATCACAGAGCAAAAATTTGCCGACCTAGGTTTAGAGCCTCAGGTCCTTGATGGTTTGAATGCAAA
AGGGTTCATTAATTGTACCCCAATTCAAGCCAAGGCATTGCCGGTACTGCTCGCCGGCCAAGACATTGCAGGCCAAGCCC
AAACGGGCACTGGTAAGACGCTCGCGTTCCTTGCTGCTACTTTTAATCACCTATTAACTACGCCTGCACCTGAAGGCCGT
AAAATCACGCAACCACGAGCTATTATTATGGCTCCAACGCGTGAGTTAGCGATTCAAATCTATAACGATGCTGAATCTCT
AATCGCAAGTACCGGCTTAAAAGCGGCACTTGCTTACGGTGGCGAACGCTATGAGAAGCAACAAAAAGTTATCGAAGCTG
GTGTTGATATCCTAATCGGAACAACTGGCCGCATTATCGATTTCTACAAACAAGGTCAAATTGACTTTAAAGCAATCCAA
GTGGTTGTTTTAGATGAAGCCGATCGCATGTTTGATTTGGGTTTCATTAAAGATATTCGTTTTGTATTCCGTCGTATGCC
AGCGCCTGCTGAGCGTCTGAATATGCTGTTTTCAGCAACATTATCTTACCGCGTACAAGAACTTGCGTTTGAACACATGC
AAGAACCTGAGCACGTAGTTGTTGAACCGGATCAAAAAACGGGTCACCTGATTACTGAAGAATTATTCTATCCTTCAAAT
GATCACAAAATGGCACTTCTTCAAACATTGATCGAAGAAGAATGGCCTGATCGTGCAATTATTTTCGCCAATACTAAACA
CAAATGTGAATTAGTTTGGGGGCATCTAGCTGCCGATAAACACCGCGTAGGCCTTCTTACTGGTGATGTTCCACAGAAAA
AACGTGAACGCATCCTAGAAGAATTTACGAAAGGTGAAGTCGATATCCTTGTTGCTACCGACGTAGCGGCTCGTGGTCTA
CACATTCCACAAGTAACACATGTATTTAATTTTGATTTACCAAATGAAGCCGAAGATTATGTTCACCGTATTGGTCGTAC
TGGTCGTGCTGGTGAAAGCGGTAATTCAATTAGTTTCGCTTGTGAAGAATACGCAATCAATCTTCCTGCAATTGAAGAAT
ACATTGAGCATTCAATTCCACAGTCTGATTACGATACATCAGCACTATTGGAAGATTTACCAGCACCAATCAGACTTCAA
CGCCGTCCACCACAAAATCGTCGTAACGGCAGTAACAATGGTCAACGTCAAAGCGGGAATCGCAAACATTCACGCCCACG
TCCACCTCGTAGCCCTCAAGCTTAA

Upstream 100 bases:

>100_bases
CGTTAAATTTAAAGGCTGATTTCATGGTAACCAGCAAATTGATGCTCTATTTGAATGGAATCCGTTTCGTATTGCAAGCT
TTAACTGATATTCTATAGTA

Downstream 100 bases:

>100_bases
TCAGAGGTCGATGAAAGAATAATAAGGATGTTATGAAAAGTTCAACAATATCACCTATGTATGCCGTCATTGATTTAGGC
TCCAATAGCTTCCATATGCT

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLAATFNHLLTTPAPEGR
KITQPRAIIMAPTRELAIQIYNDAESLIASTGLKAALAYGGERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQ
VVVLDEADRMFDLGFIKDIRFVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPDQKTGHLITEELFYPSN
DHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKHRVGLLTGDVPQKKRERILEEFTKGEVDILVATDVAARGL
HIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGESGNSISFACEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRLQ
RRPPQNRRNGSNNGQRQSGNRKHSRPRPPRSPQA

Sequences:

>Translated_434_residues
MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLAATFNHLLTTPAPEGR
KITQPRAIIMAPTRELAIQIYNDAESLIASTGLKAALAYGGERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQ
VVVLDEADRMFDLGFIKDIRFVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPDQKTGHLITEELFYPSN
DHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKHRVGLLTGDVPQKKRERILEEFTKGEVDILVATDVAARGL
HIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGESGNSISFACEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRLQ
RRPPQNRRNGSNNGQRQSGNRKHSRPRPPRSPQA
>Mature_434_residues
MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLAATFNHLLTTPAPEGR
KITQPRAIIMAPTRELAIQIYNDAESLIASTGLKAALAYGGERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQ
VVVLDEADRMFDLGFIKDIRFVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPDQKTGHLITEELFYPSN
DHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKHRVGLLTGDVPQKKRERILEEFTKGEVDILVATDVAARGL
HIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGESGNSISFACEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRLQ
RRPPQNRRNGSNNGQRQSGNRKHSRPRPPRSPQA

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=37.1273712737127, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI262118318, Length=348, Percent_Identity=37.3563218390805, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI216548263, Length=348, Percent_Identity=37.3563218390805, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI262231852, Length=348, Percent_Identity=37.3563218390805, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI13518015, Length=348, Percent_Identity=37.3563218390805, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI148613856, Length=344, Percent_Identity=36.6279069767442, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI38201710, Length=344, Percent_Identity=36.6279069767442, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=34.4173441734417, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=34.4173441734417, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=34.5108695652174, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=34.5108695652174, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=34.5108695652174, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI45446747, Length=346, Percent_Identity=34.1040462427746, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI45446743, Length=346, Percent_Identity=34.1040462427746, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI7661920, Length=383, Percent_Identity=33.6814621409922, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=35.8333333333333, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=34.8441926345609, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=34.8441926345609, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=34.8441926345609, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI41327771, Length=381, Percent_Identity=34.3832020997375, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=34.1397849462366, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI55749865, Length=373, Percent_Identity=32.9758713136729, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=33.4224598930481, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI41327773, Length=362, Percent_Identity=33.7016574585635, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI50659095, Length=374, Percent_Identity=33.9572192513369, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI13129006, Length=372, Percent_Identity=34.6774193548387, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI8922886, Length=393, Percent_Identity=34.0966921119593, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI6005743, Length=393, Percent_Identity=33.8422391857506, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=30.5039787798408, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI17505907, Length=407, Percent_Identity=30.4668304668305, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=32.0855614973262, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI13514831, Length=356, Percent_Identity=31.4606741573034, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI41327779, Length=411, Percent_Identity=32.1167883211679, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI62241022, Length=374, Percent_Identity=33.4224598930481, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI31542656, Length=425, Percent_Identity=30.8235294117647, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI83700235, Length=384, Percent_Identity=32.2916666666667, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI4503529, Length=385, Percent_Identity=34.2857142857143, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=31.1428571428571, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI4758112, Length=388, Percent_Identity=28.8659793814433, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI18375623, Length=388, Percent_Identity=28.8659793814433, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=29.4117647058824, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI38327634, Length=353, Percent_Identity=31.4447592067989, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=32.8611898016997, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=32.258064516129, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI38569505, Length=385, Percent_Identity=29.3506493506493, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI38569503, Length=385, Percent_Identity=29.3506493506493, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI256773275, Length=392, Percent_Identity=30.3571428571429, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI256223453, Length=397, Percent_Identity=27.455919395466, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI9506931, Length=407, Percent_Identity=27.2727272727273, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=29.7124600638978, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=31.8452380952381, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=34.5454545454545, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=25.6658595641646, Blast_Score=112, Evalue=6e-25,
Organism=Escherichia coli, GI1790214, Length=421, Percent_Identity=71.7339667458432, Blast_Score=629, Evalue=0.0,
Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=37.9032258064516, Blast_Score=261, Evalue=5e-71,
Organism=Escherichia coli, GI87082221, Length=387, Percent_Identity=37.2093023255814, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=8e-60,
Organism=Escherichia coli, GI1787605, Length=365, Percent_Identity=36.4383561643836, Blast_Score=212, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=39.3939393939394, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=39.3939393939394, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=39.3939393939394, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.0165289256198, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI71995724, Length=374, Percent_Identity=33.1550802139037, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507121, Length=374, Percent_Identity=33.1550802139037, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=33.5106382978723, Blast_Score=207, Evalue=8e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=35.3760445682451, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=35.0974930362117, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI32565321, Length=374, Percent_Identity=32.8877005347594, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=32.0209973753281, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=33.9779005524862, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=33.6870026525199, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17537549, Length=386, Percent_Identity=34.4559585492228, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI115533224, Length=366, Percent_Identity=33.879781420765, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=381, Percent_Identity=33.5958005249344, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=355, Percent_Identity=32.9577464788732, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=355, Percent_Identity=32.9577464788732, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=32.7956989247312, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17507945, Length=344, Percent_Identity=34.3023255813954, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=398, Percent_Identity=31.9095477386935, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=32.2751322751323, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI115532548, Length=414, Percent_Identity=28.9855072463768, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=30.1837270341207, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17552114, Length=385, Percent_Identity=30.3896103896104, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=28.6089238845144, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI71990816, Length=357, Percent_Identity=33.8935574229692, Blast_Score=161, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=381, Percent_Identity=29.9212598425197, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17505370, Length=359, Percent_Identity=32.3119777158774, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71982858, Length=388, Percent_Identity=28.0927835051546, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=29.9191374663073, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=28.5714285714286, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17536099, Length=402, Percent_Identity=30.3482587064677, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17536101, Length=402, Percent_Identity=30.3482587064677, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17536103, Length=412, Percent_Identity=29.6116504854369, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=371, Percent_Identity=27.7628032345013, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=467, Percent_Identity=26.5524625267666, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=23.8442822384428, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=28.9156626506024, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17556951, Length=363, Percent_Identity=26.1707988980716, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=28.3653846153846, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=40.5660377358491, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17557982, Length=381, Percent_Identity=21.7847769028871, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324778, Length=430, Percent_Identity=34.6511627906977, Blast_Score=240, Evalue=3e-64,
Organism=Saccharomyces cerevisiae, GI6325138, Length=434, Percent_Identity=33.4101382488479, Blast_Score=234, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=36.4902506963788, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=35.8904109589041, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321360, Length=380, Percent_Identity=35.5263157894737, Blast_Score=211, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321856, Length=384, Percent_Identity=34.375, Blast_Score=202, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=32.5068870523416, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=33.7988826815642, Blast_Score=189, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=391, Percent_Identity=32.2250639386189, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6320173, Length=418, Percent_Identity=29.9043062200957, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=350, Percent_Identity=33.1428571428571, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=31.25, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6322912, Length=384, Percent_Identity=33.0729166666667, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6322323, Length=384, Percent_Identity=33.0729166666667, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=33.972602739726, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=430, Percent_Identity=29.3023255813954, Blast_Score=169, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=31.6883116883117, Blast_Score=162, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=380, Percent_Identity=29.2105263157895, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=420, Percent_Identity=30, Blast_Score=159, Evalue=8e-40,
Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=28.8409703504043, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320119, Length=392, Percent_Identity=27.8061224489796, Blast_Score=142, Evalue=9e-35,
Organism=Saccharomyces cerevisiae, GI6322876, Length=450, Percent_Identity=29.3333333333333, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=25.6723716381418, Blast_Score=126, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=24.2352941176471, Blast_Score=116, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6324366, Length=401, Percent_Identity=24.6882793017456, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=35.6125356125356, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=35.7746478873239, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=35.5795148247978, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=38.2113821138211, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=36.9444444444444, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=35.8757062146893, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=35, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24645031, Length=383, Percent_Identity=33.1592689295039, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24644479, Length=370, Percent_Identity=33.7837837837838, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=33.1564986737401, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=33.1564986737401, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=33.1564986737401, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI281361218, Length=370, Percent_Identity=33.7837837837838, Blast_Score=204, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24644481, Length=370, Percent_Identity=33.7837837837838, Blast_Score=204, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=33.1564986737401, Blast_Score=204, Evalue=8e-53,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=34.2931937172775, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI17977678, Length=354, Percent_Identity=33.6158192090396, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=32.9700272479564, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI28575014, Length=381, Percent_Identity=30.1837270341207, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI24585582, Length=377, Percent_Identity=33.42175066313, Blast_Score=181, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24582080, Length=396, Percent_Identity=31.5656565656566, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24582078, Length=396, Percent_Identity=31.5656565656566, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI17136248, Length=396, Percent_Identity=31.5656565656566, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24582075, Length=396, Percent_Identity=31.5656565656566, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI17136814, Length=429, Percent_Identity=31.7016317016317, Blast_Score=175, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=30.5630026809651, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24583281, Length=376, Percent_Identity=29.7872340425532, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24583279, Length=376, Percent_Identity=29.7872340425532, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28571808, Length=365, Percent_Identity=33.1506849315069, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28571809, Length=365, Percent_Identity=33.1506849315069, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=34.6031746031746, Blast_Score=168, Evalue=8e-42,
Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=30.3448275862069, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=30.08356545961, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=30.08356545961, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=30.08356545961, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=30.4709141274238, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI19920478, Length=394, Percent_Identity=29.6954314720812, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24642822, Length=420, Percent_Identity=29.2857142857143, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=27.020202020202, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI21355559, Length=392, Percent_Identity=29.8469387755102, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI18859659, Length=461, Percent_Identity=26.2472885032538, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI28571338, Length=461, Percent_Identity=26.2472885032538, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=31.547619047619, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=24.6411483253589, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24640164, Length=361, Percent_Identity=22.1606648199446, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHLB_ALISL (B6EPA4)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002261695.1
- GeneID:   6988619
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0146
- HOGENOM:   HBG737336
- OMA:   SRLNMLF
- ProtClustDB:   PRK04837
- HAMAP:   MF_00661
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 48576; Mature: 48576

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKT
CCCCCCCHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHH
LAFLAATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIYNDAESLIASTGLKAALAYG
HHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCHHHEEEEECCHHHHHHHHCHHHHHHHC
GERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQVVVLDEADRMFDLGFIKDIR
CHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHH
FVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPDQKTGHLITEELFYPSN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEHHHHCCCCC
DHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKHRVGLLTGDVPQKKRERILE
CCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEHHCCCCCEEEEEECCCCHHHHHHHHH
EFTKGEVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGESGNSISFA
HHCCCCEEEEEEECHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEE
CEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRLQRRPPQNRRNGSNNGQRQSGN
EHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC
RKHSRPRPPRSPQA
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKT
CCCCCCCHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHH
LAFLAATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIYNDAESLIASTGLKAALAYG
HHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCHHHEEEEECCHHHHHHHHCHHHHHHHC
GERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQVVVLDEADRMFDLGFIKDIR
CHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHH
FVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPDQKTGHLITEELFYPSN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEHHHHCCCCC
DHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKHRVGLLTGDVPQKKRERILE
CCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEHHCCCCCEEEEEECCCCHHHHHHHHH
EFTKGEVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGESGNSISFA
HHCCCCEEEEEEECHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEE
CEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRLQRRPPQNRRNGSNNGQRQSGN
EHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC
RKHSRPRPPRSPQA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA