Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693732

Identifier: 209693732

GI number: 209693732

Start: 144627

End: 144923

Strand: Reverse

Name: 209693732

Synonym: VSAL_I0109

Alternate gene names: NA

Gene position: 144923-144627 (Counterclockwise)

Preceding gene: 209693733

Following gene: 209693731

Centisome position: 4.36

GC content: 28.62

Gene sequence:

>297_bases
ATGAAAGAATCGATTACAACAACCGTTACGGTTAGTGGTAATGGAAATACAAAACAAGCCGCTTTCAGTTCCGCATTAAA
TAATATTCAAAAAACAATTCTAAAAGATAACGAGCAAGTTATTTTACGTATAGAACCTGTTGATGTGAAATTAATTAATG
CGGAGAAAAAAGAAAGAATAGAAAAGTTTATGTTTTTCTTTTTACCTCGAAATAAAACTTCTTATTCAGTTACTTTAGAT
GTCACCGTTAATGTCACCATAATTAATATTGACCAACTGGATTTTAAATCAATATAA

Upstream 100 bases:

>100_bases
TCAATGAAGGCTTTAACGTACTTGGTTTTGGCTTCATGGATAAAGAAGAGCTAGGCCAACGATTGGTCGAAGCATTCGTT
AAAAAATACAGAAGCTAAAT

Downstream 100 bases:

>100_bases
ACACCTATTTACTTTAAATAGAAAAACTTATTTAAGTATACAAATGGAAGGTATATATAGATGTTCTTAATTATATTAAT
GAAGTCTCTAATTATAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Protein

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIEPVDVKLINAEKKERIEKFMFFFLPRNKTSYSVTLD
VTVNVTIINIDQLDFKSI

Sequences:

>Translated_98_residues
MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIEPVDVKLINAEKKERIEKFMFFFLPRNKTSYSVTLD
VTVNVTIINIDQLDFKSI
>Mature_98_residues
MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIEPVDVKLINAEKKERIEKFMFFFLPRNKTSYSVTLD
VTVNVTIINIDQLDFKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11109; Mature: 11109

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIEPVDVKLINAEKKERI
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHH
EKFMFFFLPRNKTSYSVTLDVTVNVTIINIDQLDFKSI
HHEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIEPVDVKLINAEKKERI
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHH
EKFMFFFLPRNKTSYSVTLDVTVNVTIINIDQLDFKSI
HHEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA