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The map label for this gene is yihD [H]

Identifier: 209693677

GI number: 209693677

Start: 50752

End: 51015

Strand: Reverse

Name: yihD [H]

Synonym: VSAL_I0047

Alternate gene names: 209693677

Gene position: 51015-50752 (Counterclockwise)

Preceding gene: 209693680

Following gene: 209693676

Centisome position: 1.53

GC content: 36.74

Gene sequence:

>264_bases
ATGAAATGCCATCGCGTTAACGAATTAATCGAACTCATTCATCCAGAATGGAAAAAAGAACCCGAACTAAACTTAATGCA
ATTTATTGTAAAACTAGCAGAAGAAACAAAATACGAAGGGAAAATTGAAGATCTAACCGATGATATTCTTATCTATCATC
TGAAAATGCGTAACAGCAAAAAAACAGACATGATCCCAGGTTTAGCCAAAGACCACGAAACCGATTTTAAAACGGCCATC
TTAAAAGCGCGCGGGTTACTGTAG

Upstream 100 bases:

>100_bases
TTGTCTGCGCTTTTTTCTTTTTATAATCCTGCAATTCCCGCTCTAACTTCCCATAAAATTTCGATATACTTATCCTTAAT
AATTATAAGGAGACTGCTCA

Downstream 100 bases:

>100_bases
GCCTTTCGCTTATTTCCGTTTAACGATCTAATTTATTCTAACGAATTAGATCGTTTTCAAACCAAATAAAACACACTTTT
TTAACTAAATTTGAACCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDLTDDILIYHLKMRNSKKTDMIPGLAKDHETDFKTAI
LKARGLL

Sequences:

>Translated_87_residues
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDLTDDILIYHLKMRNSKKTDMIPGLAKDHETDFKTAI
LKARGLL
>Mature_87_residues
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDLTDDILIYHLKMRNSKKTDMIPGLAKDHETDFKTAI
LKARGLL

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0845 [H]

Homologues:

Organism=Escherichia coli, GI1790289, Length=87, Percent_Identity=64.367816091954, Blast_Score=127, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009383
- ProDom:   PD029038 [H]

Pfam domain/function: PF06288 DUF1040 [H]

EC number: NA

Molecular weight: Translated: 10261; Mature: 10261

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDLTDDILIYHLKMRNSK
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
KTDMIPGLAKDHETDFKTAILKARGLL
CCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDLTDDILIYHLKMRNSK
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
KTDMIPGLAKDHETDFKTAILKARGLL
CCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]