Click here to switch to the map view.

The map label for this gene is 209552181

Identifier: 209552181

GI number: 209552181

Start: 291487

End: 291864

Strand: Reverse

Name: 209552181

Synonym: Rleg2_6339

Alternate gene names: NA

Gene position: 291864-291487 (Counterclockwise)

Preceding gene: 209552182

Following gene: 209552180

Centisome position: 94.53

GC content: 55.82

Gene sequence:

>378_bases
ATGGGCGAGCGGGTATCAACAATGGCATTGCGAGAAGTTTGCTCTTCGGAAGAAATCGCAGAGGGTCAGCACAAGCTGAT
CAACCACTACAAAGGCGAAATCGGTGTTGTCAGATACAACGGTCGCCTCGTGGCAATTCGAAATCGGTGTCCGCACGCAG
GTGCTCAACTGCTTCTCAAAGCGGTCCGGCCGACAACAGTAGCCGCATGCCCTCACCAGATCGAGCTGGGCTACCAAGAC
GGGGTCTTTACCTGCCCTTGGCATCACTGGGAGTTCGATCTGCGCGACGGCTCTTGTCTCGCTGACCCGCGCCTGAAGCT
CGAGAAATTCCCCGTTCAAGAAACCGACGGAAAAATCGTCGTCGAAATCCCCGACTGA

Upstream 100 bases:

>100_bases
GCTTCCGATGCAGGCGAAAACTAATGAATTAGTCGAGCGGCGAGCAAATCGTCGCTTGACCTACATTGCAACTGTACTAC
AGTTGTGTCAAAGGCGGAGC

Downstream 100 bases:

>100_bases
GCTCTCCAGAATTCAAGAGGAACGAAATGAACGTACAGGACAACAGCTCGGTTGAGAGCGGAACGCTGATCACAAGCTGG
GCGATCGATTCCGACGTGCA

Product: Rieske (2Fe-2S) domain protein

Products: NA

Alternate protein names: Rieske Domain Protein; Rieske Domain-Containing Protein; Ferredoxin; Rieske Iron-Sulfur Domain Protein

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGERVSTMALREVCSSEEIAEGQHKLINHYKGEIGVVRYNGRLVAIRNRCPHAGAQLLLKAVRPTTVAACPHQIELGYQD
GVFTCPWHHWEFDLRDGSCLADPRLKLEKFPVQETDGKIVVEIPD

Sequences:

>Translated_125_residues
MGERVSTMALREVCSSEEIAEGQHKLINHYKGEIGVVRYNGRLVAIRNRCPHAGAQLLLKAVRPTTVAACPHQIELGYQD
GVFTCPWHHWEFDLRDGSCLADPRLKLEKFPVQETDGKIVVEIPD
>Mature_124_residues
GERVSTMALREVCSSEEIAEGQHKLINHYKGEIGVVRYNGRLVAIRNRCPHAGAQLLLKAVRPTTVAACPHQIELGYQDG
VFTCPWHHWEFDLRDGSCLADPRLKLEKFPVQETDGKIVVEIPD

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14062; Mature: 13931

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERVSTMALREVCSSEEIAEGQHKLINHYKGEIGVVRYNGRLVAIRNRCPHAGAQLLLK
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCEEEEECCCCCCHHHHHHHH
AVRPTTVAACPHQIELGYQDGVFTCPWHHWEFDLRDGSCLADPRLKLEKFPVQETDGKIV
HCCCCEEECCCCEEEECCCCCEEECCCCCEEEECCCCCEECCCCCEEEECCCCCCCCEEE
VEIPD
EEECC
>Mature Secondary Structure 
GERVSTMALREVCSSEEIAEGQHKLINHYKGEIGVVRYNGRLVAIRNRCPHAGAQLLLK
CCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCEEEEECCCCCCHHHHHHHH
AVRPTTVAACPHQIELGYQDGVFTCPWHHWEFDLRDGSCLADPRLKLEKFPVQETDGKIV
HCCCCEEECCCCEEEECCCCCEEECCCCCEEEECCCCCEECCCCCEEEECCCCCCCCEEE
VEIPD
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA