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The map label for this gene is pobB [H]

Identifier: 209552179

GI number: 209552179

Start: 289313

End: 290260

Strand: Reverse

Name: pobB [H]

Synonym: Rleg2_6337

Alternate gene names: 209552179

Gene position: 290260-289313 (Counterclockwise)

Preceding gene: 209552180

Following gene: 209552178

Centisome position: 94.01

GC content: 57.59

Gene sequence:

>948_bases
ATGAGCGAAAACGGTTCGTTCGATTTGCGGGTTGTCGAAACTCGGTTCAAGGCAGAAGATGTGGTCGAGCTTGTTCTCGC
GCGGTCGGATGGCGCACCGCTACCGCGCTGGAGGCCCGGATCTCATATCTCGCTCAAGCTTCGCGACGGACTGGAGCGAC
AATATTCGCTATGCGGACGCGTTGATGACATGGCCACCTGGCGGATTGCGGTTCTCAGAGCCCGGGAAAGCCGAGGAGGC
TCTGCGCATATCCATGACGACGTGAAATCCGGTGCCTTTTTGCGTTCCACTGGCCTACGCAATCATTTTCCGCTCGAGAA
AGCCGAAGGCTACGTCTTCATTGCCGGAGGTATCGGCATCACACCGATGCTAGCCATGATCGACCAAGCGGAAGCTCAGG
GGACCTCCTGGGTTCTCTATTATGGAGGACGAAGCCGCGCTTCCATGGCTTACCTCGCCGAACTGAAGGCATATGGTGAT
CGCGTCGTCGTTGTTCCTGAGGATCAACGGGGTATGCTTGATCTTCGCGGCATCGCGGCGGGGGTGAAGCCCGGCCATCA
TGTGTACGCATGTGGACCAGAGGGACTTCTCACCGCGCTCGTCACTCTATCAGAGGCATGGCCAGCGGGAACATTGCACC
TGGAACGGTTCAGTCCCATTGAAGTCGATTCGAGTGGCGACAAGCCTTTTACCGTTCATCTTAACGCGAGCGGCAAATCG
ATCGTCGTTGGAGCAAACGAGACCATTCTTGATGCGATGGCCCGCGAAGGAATGCAGCCGCAATCGTCGTGTCGCGAGGG
CACCTGCGGGACCTGCGAAACGCGAGTACTTCGTGGAAAAGTCGACCACCGTGACACAGTTCTAACCGCCTCCGAGCGCG
AGGCGGGAGACTACATGATGATCTGCGTCTCACGCGCCGCTGGCGACGATATTGAAATCGATGCTTGA

Upstream 100 bases:

>100_bases
GTTCATCGACAATCCTTATGCCTTCTTCAAGCTGAGACGGAACGGCAGCACGCCTCGCGAAGGCGTATCGCGGCTTGTTT
AAAGGGGAAGGAAACCGTTC

Downstream 100 bases:

>100_bases
CGTCGCAAAAAGGGGTAATCAATGCCAATCGTACACTCTCCGGGTACCCGCGTCGCCGTCAGCCTGGGCGTCGATTTCGA
CGCCCACACAGTGTGGGAGG

Product: ferredoxin

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSENGSFDLRVVETRFKAEDVVELVLARSDGAPLPRWRPGSHISLKLRDGLERQYSLCGRVDDMATWRIAVLRARESRGG
SAHIHDDVKSGAFLRSTGLRNHFPLEKAEGYVFIAGGIGITPMLAMIDQAEAQGTSWVLYYGGRSRASMAYLAELKAYGD
RVVVVPEDQRGMLDLRGIAAGVKPGHHVYACGPEGLLTALVTLSEAWPAGTLHLERFSPIEVDSSGDKPFTVHLNASGKS
IVVGANETILDAMAREGMQPQSSCREGTCGTCETRVLRGKVDHRDTVLTASEREAGDYMMICVSRAAGDDIEIDA

Sequences:

>Translated_315_residues
MSENGSFDLRVVETRFKAEDVVELVLARSDGAPLPRWRPGSHISLKLRDGLERQYSLCGRVDDMATWRIAVLRARESRGG
SAHIHDDVKSGAFLRSTGLRNHFPLEKAEGYVFIAGGIGITPMLAMIDQAEAQGTSWVLYYGGRSRASMAYLAELKAYGD
RVVVVPEDQRGMLDLRGIAAGVKPGHHVYACGPEGLLTALVTLSEAWPAGTLHLERFSPIEVDSSGDKPFTVHLNASGKS
IVVGANETILDAMAREGMQPQSSCREGTCGTCETRVLRGKVDHRDTVLTASEREAGDYMMICVSRAAGDDIEIDA
>Mature_314_residues
SENGSFDLRVVETRFKAEDVVELVLARSDGAPLPRWRPGSHISLKLRDGLERQYSLCGRVDDMATWRIAVLRARESRGGS
AHIHDDVKSGAFLRSTGLRNHFPLEKAEGYVFIAGGIGITPMLAMIDQAEAQGTSWVLYYGGRSRASMAYLAELKAYGDR
VVVVPEDQRGMLDLRGIAAGVKPGHHVYACGPEGLLTALVTLSEAWPAGTLHLERFSPIEVDSSGDKPFTVHLNASGKSI
VVGANETILDAMAREGMQPQSSCREGTCGTCETRVLRGKVDHRDTVLTASEREAGDYMMICVSRAAGDDIEIDA

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=325, Percent_Identity=37.8461538461538, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787658, Length=355, Percent_Identity=30.7042253521127, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34190; Mature: 34059

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENGSFDLRVVETRFKAEDVVELVLARSDGAPLPRWRPGSHISLKLRDGLERQYSLCGR
CCCCCCEEEEEEEEHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC
VDDMATWRIAVLRARESRGGSAHIHDDVKSGAFLRSTGLRNHFPLEKAEGYVFIAGGIGI
CCHHHHEEEEEEEECCCCCCCEEECCHHHCCCEEEECCCCCCCCCHHCCCEEEEECCCCH
TPMLAMIDQAEAQGTSWVLYYGGRSRASMAYLAELKAYGDRVVVVPEDQRGMLDLRGIAA
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEHHEEC
GVKPGHHVYACGPEGLLTALVTLSEAWPAGTLHLERFSPIEVDSSGDKPFTVHLNASGKS
CCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCEEEEEECCCCE
IVVGANETILDAMAREGMQPQSSCREGTCGTCETRVLRGKVDHRDTVLTASEREAGDYMM
EEEECCHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHEECCCCCCCEEEEECCCCCCCEEE
ICVSRAAGDDIEIDA
EEEECCCCCCEEECC
>Mature Secondary Structure 
SENGSFDLRVVETRFKAEDVVELVLARSDGAPLPRWRPGSHISLKLRDGLERQYSLCGR
CCCCCEEEEEEEEHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC
VDDMATWRIAVLRARESRGGSAHIHDDVKSGAFLRSTGLRNHFPLEKAEGYVFIAGGIGI
CCHHHHEEEEEEEECCCCCCCEEECCHHHCCCEEEECCCCCCCCCHHCCCEEEEECCCCH
TPMLAMIDQAEAQGTSWVLYYGGRSRASMAYLAELKAYGDRVVVVPEDQRGMLDLRGIAA
HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEHHEEC
GVKPGHHVYACGPEGLLTALVTLSEAWPAGTLHLERFSPIEVDSSGDKPFTVHLNASGKS
CCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCEEEEEECCCCE
IVVGANETILDAMAREGMQPQSSCREGTCGTCETRVLRGKVDHRDTVLTASEREAGDYMM
EEEECCHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHEECCCCCCCEEEEECCCCCCCEEE
ICVSRAAGDDIEIDA
EEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]