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The map label for this gene is ydeM [H]

Identifier: 209552125

GI number: 209552125

Start: 226831

End: 227259

Strand: Reverse

Name: ydeM [H]

Synonym: Rleg2_6277

Alternate gene names: 209552125

Gene position: 227259-226831 (Counterclockwise)

Preceding gene: 209552126

Following gene: 209552123

Centisome position: 73.61

GC content: 56.88

Gene sequence:

>429_bases
ATGAGGACGGGAGATTTCCTGAAAACGGAAATGTTTGGCATATCCAGCAGCGAGATCATCGAATTCGCCAGATTGTGGGA
TCCGCAGCCGTTCCATCTGTCCGAGGAGGCGGCAAGTTTGACGCCGTTCGGCGGGTTGGTCGGGAGCGGGCTCCAATCCT
TGTGCGTCATGGTGAAGCTGGGCGTTGAATCCGGCTTTCTTACGAAGGACGCGATTGCCGGTCTGGCCATCGAGAATCTA
CGTTTTCGAAATCCCCTCAAGCCTGGGACCAGGGTTTTCGCGGAGTTCACGGCGAAGAGCGCCCGCCCATCTGCCAAGCA
TCCTTCCCGAGTGATTGCGACTATCGCTGCGAGCTTGATCGAAGAAAAGGGACCTACGATCCTCACCGCCGAGCTCGTGA
ACCTCTATTCGGGTAGTCCGATCGCTTAG

Upstream 100 bases:

>100_bases
CGTCGTTTAATTTCACGCTTTTTTTAATTAAGGTTCGCGCCGGCAACTGTTGTCGCGACCTAAGATACCTATGTGAAGTT
TCCTTACTGAGAGGGTTAGG

Downstream 100 bases:

>100_bases
CGTGCCGTCAGATCTCTGAATGCTTCACGTTCGCGGAAGCGGCCGCCGAGTGCATGCCTCCATCGCTGCCGGTTGCCGAT
AATCGGGCAGATCACGCCGT

Product: MaoC domain protein dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRTGDFLKTEMFGISSSEIIEFARLWDPQPFHLSEEAASLTPFGGLVGSGLQSLCVMVKLGVESGFLTKDAIAGLAIENL
RFRNPLKPGTRVFAEFTAKSARPSAKHPSRVIATIAASLIEEKGPTILTAELVNLYSGSPIA

Sequences:

>Translated_142_residues
MRTGDFLKTEMFGISSSEIIEFARLWDPQPFHLSEEAASLTPFGGLVGSGLQSLCVMVKLGVESGFLTKDAIAGLAIENL
RFRNPLKPGTRVFAEFTAKSARPSAKHPSRVIATIAASLIEEKGPTILTAELVNLYSGSPIA
>Mature_142_residues
MRTGDFLKTEMFGISSSEIIEFARLWDPQPFHLSEEAASLTPFGGLVGSGLQSLCVMVKLGVESGFLTKDAIAGLAIENL
RFRNPLKPGTRVFAEFTAKSARPSAKHPSRVIATIAASLIEEKGPTILTAELVNLYSGSPIA

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 15208; Mature: 15208

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGDFLKTEMFGISSSEIIEFARLWDPQPFHLSEEAASLTPFGGLVGSGLQSLCVMVKL
CCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH
GVESGFLTKDAIAGLAIENLRFRNPLKPGTRVFAEFTAKSARPSAKHPSRVIATIAASLI
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EEKGPTILTAELVNLYSGSPIA
HHCCCEEEHHHHHHHCCCCCCC
>Mature Secondary Structure
MRTGDFLKTEMFGISSSEIIEFARLWDPQPFHLSEEAASLTPFGGLVGSGLQSLCVMVKL
CCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH
GVESGFLTKDAIAGLAIENLRFRNPLKPGTRVFAEFTAKSARPSAKHPSRVIATIAASLI
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EEKGPTILTAELVNLYSGSPIA
HHCCCEEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]