| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence. |
|---|---|
| Accession | NC_011370 |
| Length | 308,747 |
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The map label for this gene is 209551954
Identifier: 209551954
GI number: 209551954
Start: 14003
End: 14533
Strand: Reverse
Name: 209551954
Synonym: Rleg2_6088
Alternate gene names: NA
Gene position: 14533-14003 (Counterclockwise)
Preceding gene: 209551955
Following gene: 209551953
Centisome position: 4.71
GC content: 56.12
Gene sequence:
>531_bases ATGTTTTGCCTCTATGCGACCGGGATCGAAAATAGCTTGATTGATCCGCACGCCGCACAACATAACGCTGGCCGCCGCCA TTGCATCGGCAAGATGAAGTTCAAAGTGACTAACTGGGCGGAGTATGAGGCGGGCCTTCGCCGCCGTGGCAGTTTGACCC TTTGGATAATGCCAGACGCACTGGCGGGGTGGGCAGCGCCACGTCGCAAGATGCGTGGTGGCCAGCCTCTCTATTCGGAT CTTGCGGTCGAAACGACGCTGATGCTGTGCATGGTATTCGGATTGCGGTTGCGCCAGAGCGAAGGGCTTCTGAGTTCGGT GCTTGATATGATGAGATTGGATTTGGCTGTGCCCGATCACACAACACTCAGCCGGCGGGCCAGAACCCAAGTGGCATCGC ACCAGTCGGGCCTACATCGGATTGTGGGTGAGACGTCTATGCGCCGCACCGATGAATCCTTGAACGCGAATTCTACGTTC CTAAGTGTGATTGAGGGAAGGAAGGAACCCCTCCCATCGAACGAAATGTAA
Upstream 100 bases:
>100_bases ACGCGCTTTGCGTGAGGGCTGGCTGCATCAATCGTTTGTTTAGGGGCTTCCCTGGGGCTTTTTTGTATCGTTCGGGAATT GGTGCACGGATCCAATATCA
Downstream 100 bases:
>100_bases ATATTCAACTGAATCAGGTGTGTAGATAATGATCGGACGTTCTGAAATTTTTGACTACGTCAAAAAGAAATATGATGTCA CCCCCGACTACCCGTTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MFCLYATGIENSLIDPHAAQHNAGRRHCIGKMKFKVTNWAEYEAGLRRRGSLTLWIMPDALAGWAAPRRKMRGGQPLYSD LAVETTLMLCMVFGLRLRQSEGLLSSVLDMMRLDLAVPDHTTLSRRARTQVASHQSGLHRIVGETSMRRTDESLNANSTF LSVIEGRKEPLPSNEM
Sequences:
>Translated_176_residues MFCLYATGIENSLIDPHAAQHNAGRRHCIGKMKFKVTNWAEYEAGLRRRGSLTLWIMPDALAGWAAPRRKMRGGQPLYSD LAVETTLMLCMVFGLRLRQSEGLLSSVLDMMRLDLAVPDHTTLSRRARTQVASHQSGLHRIVGETSMRRTDESLNANSTF LSVIEGRKEPLPSNEM >Mature_176_residues MFCLYATGIENSLIDPHAAQHNAGRRHCIGKMKFKVTNWAEYEAGLRRRGSLTLWIMPDALAGWAAPRRKMRGGQPLYSD LAVETTLMLCMVFGLRLRQSEGLLSSVLDMMRLDLAVPDHTTLSRRARTQVASHQSGLHRIVGETSMRRTDESLNANSTF LSVIEGRKEPLPSNEM
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 19754; Mature: 19754
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCLYATGIENSLIDPHAAQHNAGRRHCIGKMKFKVTNWAEYEAGLRRRGSLTLWIMPDA CEEEEECCCCCCCCCCCCHHCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCEEEEECCCH LAGWAAPRRKMRGGQPLYSDLAVETTLMLCMVFGLRLRQSEGLLSSVLDMMRLDLAVPDH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC TTLSRRARTQVASHQSGLHRIVGETSMRRTDESLNANSTFLSVIEGRKEPLPSNEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFCLYATGIENSLIDPHAAQHNAGRRHCIGKMKFKVTNWAEYEAGLRRRGSLTLWIMPDA CEEEEECCCCCCCCCCCCHHCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCEEEEECCCH LAGWAAPRRKMRGGQPLYSDLAVETTLMLCMVFGLRLRQSEGLLSSVLDMMRLDLAVPDH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC TTLSRRARTQVASHQSGLHRIVGETSMRRTDESLNANSTFLSVIEGRKEPLPSNEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]