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The map label for this gene is yfbS [C]

Identifier: 209550728

GI number: 209550728

Start: 3231354

End: 3233096

Strand: Direct

Name: yfbS [C]

Synonym: Rleg2_3152

Alternate gene names: 209550728

Gene position: 3231354-3233096 (Clockwise)

Preceding gene: 209550727

Following gene: 209550729

Centisome position: 71.21

GC content: 63.68

Gene sequence:

>1743_bases
ATGACGTTCGAGCAAGTATCCCTGCTGATCCTTCTGCTGGCGATGCTCGTTCTCTTCTCTTTCGATCGCATCCGCATCGA
GGTGATTTCGATCGCCGGCCTGCTCGCCGGCTATGCGCTGGGGCTTTATCCCGCCGACCACATTTTCACCGGCTTTGCCA
GTCCCGTTGTCATCACCGTCGTCGAGATCCTGCTGATCGTCCAGGTGCTGGCGCGCGCCAGGCTCTTCGACAATCTCGCC
GCCCGTTTCGCCGCCGCCAAGCCTTCCGGCTTCAAGGTCATCGCCGGCGCTTCCTCGCTTGCCGGCTTCATTTCCATCTT
CATGAACAATATCGGCGCCTTTGCAATCAGCCTGCCGGTGACGCTGCGGCTCGGCATGGCGCTAACGATCCCCCGCCGCC
AGCTTGTCATGCCCCTCTCGTTTGCGGCGCTGCTCGGCGGCCTCGTCTCGCTGATCGGCACGCCGGCCAACCTGCTCGTC
AGCGACGCGCTCGCCAAGGCGACCGGAGCAGGCTTTCACTTTTTCGATTTCGCCTATGTCGGCCTGCCGGTCGCAATCGC
CGGCATTCTGCTCATCGCCTTTCGCATCCAGCGCCTCTTTCCTGAACCTGACGAAACGCCGGCAACGATCTCCCCAGGCA
CGCGCCGCATCGTCGTCGAGCGCCGCATTCCCGACATTTCGCCCCTGATCGGCATCCGGCTTTCCGATTGTCCGACGGAT
TTCGGCATCAAACCGCACGCCCTGATCCGCGGCGACAATTTCGTCTTCGGTCCCCTCGATCAGTCGGTGATTTCAGCCGG
CGACGTACTGCTTGCCGAAGGCGCCGATGCGGTTTTTGCCGGACTTGCTGCCACCCAGGCGCTGATCGCCGATTTCAATC
CGCATGGCCTCCAGCCGGATTTTTCCCGTGTCGAAGCCGTTGTCATGCCGGAAAGCACGCTGGTCGGTTCGCGCGTCCGC
TCGCTTGAAGTCTTCCAAAGCCGTGGCGTCGCGGTCACCGCTCTATCCATGCGCGCGCCGCGCATCGAGGGCCGTTTCAT
CGACCTGCAACTGTCGATCGGCGATATATTGACGCTGGAAGGGCCGCGAACGGCAATCGCCGAAGCGCTCGAAGAAAGCG
AGTGCCTGCCGCTCGCCCCGACAGCCCCGGCCGAACCGGCCGTCCTCTCCCGGCGGCCCTTCGCGCTCTTTGCCTGCGGC
GTCGCGGCCTCTGCGGCCGGCTTGCCTCCCGACATCGCCTTTGCCGGTGTCGTACTTGTGCTCGCCTTGCTCAATCATCT
GAACATCCGCCAGGCGATGGCCGATCTCAACTGGCCGATCATTATCATGCTGGCAGCGATGATCCCGATCGGCCAGGCGG
TGGCAAGCACCGGCGCGGCCGCAATCATCGCCGGCTGGCTGAGCCTCGTCGTGCCGGTCAGCCAGCCGCTCTCCGGCATC
GCCCTCATCCTCTTCCTCGCCATGGCGCTGACGCCCTTCGTCAACAATGCGACGGTCGCGATCGTCCTGACCCCGATCGC
ACTGGAATTCGCAAAGGCCGGCAGCCACGCGCCGGGCGCCTATTTGATTGCCGTCGCCGTCGGGGCCTCACTGGATTTCC
TGACGCCCTTCGGCCATCATAACAACACGCTGGCAATGGGCATCGGCGGCTACCGCTTCAGTGACTTCCTGCGCGCCGGC
TGGCCGCTTGCCCTCACAAGCTATGGCCTCGCTTTGTTTCTCCTGGCTCTGTTCTGGCTGTGA

Upstream 100 bases:

>100_bases
CGAGACATGAGGATGGGTCAATCTTTGCCTGAGGCCACCTCTGTACAGCGCAGGAGGAACGACTACAGTCTGCCCAATCG
ATGAAACACCGGATCCACGC

Downstream 100 bases:

>100_bases
TGCGATACTTGGCATCTGACTTGACTTCCCCCGCGATGAAACTAGAGCAGGAAGCCTTCACCCAATTACAAGGACAGTCG
AGCGCCGTGCGAATTCTCTC

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MTFEQVSLLILLLAMLVLFSFDRIRIEVISIAGLLAGYALGLYPADHIFTGFASPVVITVVEILLIVQVLARARLFDNLA
ARFAAAKPSGFKVIAGASSLAGFISIFMNNIGAFAISLPVTLRLGMALTIPRRQLVMPLSFAALLGGLVSLIGTPANLLV
SDALAKATGAGFHFFDFAYVGLPVAIAGILLIAFRIQRLFPEPDETPATISPGTRRIVVERRIPDISPLIGIRLSDCPTD
FGIKPHALIRGDNFVFGPLDQSVISAGDVLLAEGADAVFAGLAATQALIADFNPHGLQPDFSRVEAVVMPESTLVGSRVR
SLEVFQSRGVAVTALSMRAPRIEGRFIDLQLSIGDILTLEGPRTAIAEALEESECLPLAPTAPAEPAVLSRRPFALFACG
VAASAAGLPPDIAFAGVVLVLALLNHLNIRQAMADLNWPIIIMLAAMIPIGQAVASTGAAAIIAGWLSLVVPVSQPLSGI
ALILFLAMALTPFVNNATVAIVLTPIALEFAKAGSHAPGAYLIAVAVGASLDFLTPFGHHNNTLAMGIGGYRFSDFLRAG
WPLALTSYGLALFLLALFWL

Sequences:

>Translated_580_residues
MTFEQVSLLILLLAMLVLFSFDRIRIEVISIAGLLAGYALGLYPADHIFTGFASPVVITVVEILLIVQVLARARLFDNLA
ARFAAAKPSGFKVIAGASSLAGFISIFMNNIGAFAISLPVTLRLGMALTIPRRQLVMPLSFAALLGGLVSLIGTPANLLV
SDALAKATGAGFHFFDFAYVGLPVAIAGILLIAFRIQRLFPEPDETPATISPGTRRIVVERRIPDISPLIGIRLSDCPTD
FGIKPHALIRGDNFVFGPLDQSVISAGDVLLAEGADAVFAGLAATQALIADFNPHGLQPDFSRVEAVVMPESTLVGSRVR
SLEVFQSRGVAVTALSMRAPRIEGRFIDLQLSIGDILTLEGPRTAIAEALEESECLPLAPTAPAEPAVLSRRPFALFACG
VAASAAGLPPDIAFAGVVLVLALLNHLNIRQAMADLNWPIIIMLAAMIPIGQAVASTGAAAIIAGWLSLVVPVSQPLSGI
ALILFLAMALTPFVNNATVAIVLTPIALEFAKAGSHAPGAYLIAVAVGASLDFLTPFGHHNNTLAMGIGGYRFSDFLRAG
WPLALTSYGLALFLLALFWL
>Mature_579_residues
TFEQVSLLILLLAMLVLFSFDRIRIEVISIAGLLAGYALGLYPADHIFTGFASPVVITVVEILLIVQVLARARLFDNLAA
RFAAAKPSGFKVIAGASSLAGFISIFMNNIGAFAISLPVTLRLGMALTIPRRQLVMPLSFAALLGGLVSLIGTPANLLVS
DALAKATGAGFHFFDFAYVGLPVAIAGILLIAFRIQRLFPEPDETPATISPGTRRIVVERRIPDISPLIGIRLSDCPTDF
GIKPHALIRGDNFVFGPLDQSVISAGDVLLAEGADAVFAGLAATQALIADFNPHGLQPDFSRVEAVVMPESTLVGSRVRS
LEVFQSRGVAVTALSMRAPRIEGRFIDLQLSIGDILTLEGPRTAIAEALEESECLPLAPTAPAEPAVLSRRPFALFACGV
AASAAGLPPDIAFAGVVLVLALLNHLNIRQAMADLNWPIIIMLAAMIPIGQAVASTGAAAIIAGWLSLVVPVSQPLSGIA
LILFLAMALTPFVNNATVAIVLTPIALEFAKAGSHAPGAYLIAVAVGASLDFLTPFGHHNNTLAMGIGGYRFSDFLRAGW
PLALTSYGLALFLLALFWL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=601, Percent_Identity=27.7870216306156, Blast_Score=158, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 61002; Mature: 60871

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFEQVSLLILLLAMLVLFSFDRIRIEVISIAGLLAGYALGLYPADHIFTGFASPVVITV
CCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH
VEILLIVQVLARARLFDNLAARFAAAKPSGFKVIAGASSLAGFISIFMNNIGAFAISLPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCEEEECCH
TLRLGMALTIPRRQLVMPLSFAALLGGLVSLIGTPANLLVSDALAKATGAGFHFFDFAYV
HHEECEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH
GLPVAIAGILLIAFRIQRLFPEPDETPATISPGTRRIVVERRIPDISPLIGIRLSDCPTD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCEEECCCCCC
FGIKPHALIRGDNFVFGPLDQSVISAGDVLLAEGADAVFAGLAATQALIADFNPHGLQPD
CCCCCCEEEECCCEEECCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
FSRVEAVVMPESTLVGSRVRSLEVFQSRGVAVTALSMRAPRIEGRFIDLQLSIGDILTLE
HHHCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEC
GPRTAIAEALEESECLPLAPTAPAEPAVLSRRPFALFACGVAASAAGLPPDIAFAGVVLV
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHEEEHHHHHHCCCCCHHHHHHHHHHH
LALLNHLNIRQAMADLNWPIIIMLAAMIPIGQAVASTGAAAIIAGWLSLVVPVSQPLSGI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH
ALILFLAMALTPFVNNATVAIVLTPIALEFAKAGSHAPGAYLIAVAVGASLDFLTPFGHH
HHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCCCCC
NNTLAMGIGGYRFSDFLRAGWPLALTSYGLALFLLALFWL
CCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TFEQVSLLILLLAMLVLFSFDRIRIEVISIAGLLAGYALGLYPADHIFTGFASPVVITV
CHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH
VEILLIVQVLARARLFDNLAARFAAAKPSGFKVIAGASSLAGFISIFMNNIGAFAISLPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCEEEECCH
TLRLGMALTIPRRQLVMPLSFAALLGGLVSLIGTPANLLVSDALAKATGAGFHFFDFAYV
HHEECEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH
GLPVAIAGILLIAFRIQRLFPEPDETPATISPGTRRIVVERRIPDISPLIGIRLSDCPTD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCEEECCCCCC
FGIKPHALIRGDNFVFGPLDQSVISAGDVLLAEGADAVFAGLAATQALIADFNPHGLQPD
CCCCCCEEEECCCEEECCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
FSRVEAVVMPESTLVGSRVRSLEVFQSRGVAVTALSMRAPRIEGRFIDLQLSIGDILTLE
HHHCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEC
GPRTAIAEALEESECLPLAPTAPAEPAVLSRRPFALFACGVAASAAGLPPDIAFAGVVLV
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHEEEHHHHHHCCCCCHHHHHHHHHHH
LALLNHLNIRQAMADLNWPIIIMLAAMIPIGQAVASTGAAAIIAGWLSLVVPVSQPLSGI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH
ALILFLAMALTPFVNNATVAIVLTPIALEFAKAGSHAPGAYLIAVAVGASLDFLTPFGHH
HHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCCCCC
NNTLAMGIGGYRFSDFLRAGWPLALTSYGLALFLLALFWL
CCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]