Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550712
Identifier: 209550712
GI number: 209550712
Start: 3208169
End: 3209638
Strand: Direct
Name: 209550712
Synonym: Rleg2_3136
Alternate gene names: NA
Gene position: 3208169-3209638 (Clockwise)
Preceding gene: 209550711
Following gene: 209550714
Centisome position: 70.7
GC content: 61.5
Gene sequence:
>1470_bases ATGTCGATAGAGCCGATCGGTTTCGTGGTTCTGCTGCTTGGCGTGCTCAGCATGCTGAACGGCGCGCGTTTTGCCATCAC CGCCCTTTGCCTTTCGACGTTGCTCGGTGCCGCAGCGGCTCTGCAGTTGCCGGCGCTCGGCGGCAGCAGCATCCAGCCGA GCCATCTTCTGGTGCTCTTTCTGGTCATGACGGTCCTGCTGCGCCCGGTTCAGATGCAGGCGACGCTCGCCAGCATCGCC TATCCCGGCCCCGGCTTCTGGTTTGCCTGCTACATCCTGTTCTCCGTGGTGTCGTCCTTCTTCCTGCCCCGTATTTTTGC CGGCGCGACCCTCGTTTATTCCTCCGCCAGAGACCCCTCGGGGATGATGTCGACGGTAGCGGCTCCACTGGCTCCGGGTT CATCCAATATCAGCCAGTCCGTTTATCTTCTCGGCGACCTCGCCTGCTTCGCCGTCGTCGCCGGACTTGCCCGGCTGGGA TATGGACGTTTCATCGCGCAGCAGCTGATCGTCGCGTCGATAGCGTGTTTTGCCTTCGCGCTGATCGACCTCGTATCGTT CCAGATCGGCCAGGCCCAACTGCTCGATATCATCAGAAATGCGAATTATACGATGCACACGGCCGAGACCATCCACGGCT TCAAGCGCATCGTCGGCCCCTTTCCCGAAGCAAGCGCCTATGGCGCAGTCGCATTGGCTTATTTCGCCTTCACGCTCATG CTGTGGCTGGAGCGCGTCCAAAGCCGGATGGCTGGGTTGGCAACGCTTCTTATCGGCCCGACCATCGTGCTCTGCACCTC GACAACCGCCTATGTCGCGGGCGTCTTCCTTGTCTGCATGTTCGTGTTGTTCTGCCTGAAACGACTGATCGGCGGTTCCG CCACGACCCCGCACATGACTTTCCTTGCGATCACGCTGTTCTTCATCCCTTGCGCCATCACCGCGCTCAGCCTTGTCCCC GATGCGTGGAATTCCATCGCCGGTCTCCTGACCACCACCGTATCGGACAAGCTGCAATCGCAGTCCGGCGAAGAGCGCAC CGCCTGGAACACCCTGGCATTGATCGCATTCGTCGATACCGCCACTTTCGGCGCCGGATTGGGCACGGTTCGAGCTTCCA GTTTCATCGCCGCATTGCTGTCCAATGTCGGATTGACCGGCACCGCTCTGTTCGCCGTCTTCGTGTACAGCCTGGTGAGG GCAGCCGGTCGGTACAAATCCGGCGACCGGGAAACCCATGCGATCGGAACCGCCGCCGTGATGGCATCCATCGCACAGAT CGGCTCCGCAGCGATATCGGGAAGCGGCACGGATCTCGGTTTGCTGTTCAGCACTTCGGCGGGGCTGGCAGTGGGCTGCC TGGCCGGTGCTTATGTGCCGCGGCATCGGGCGGCCTCATCGCCTGCGAACCGGCGTCCGCTAGAGGCATCGGCATCTCCT TTGAGAGCGCCGATGTATTCAGCGCCATGA
Upstream 100 bases:
>100_bases CCGGCGGGCTTTCGCCTCGCACATCCTGCCGAAAGCTGGATGCCAGTTTTCGGCAAATGCCAGGCCTCGGCCGCTCGCAC TTCTGCTCGGGATCTGAAGC
Downstream 100 bases:
>100_bases CGCCCGCTCGGGACTTTCGAGATGGCGCTAAATGGCAACCTGGCGCAGCCGGACACGGGCGAACACGGGTTCGCTGCCGC TCGACCGAGCCGCATCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MSIEPIGFVVLLLGVLSMLNGARFAITALCLSTLLGAAAALQLPALGGSSIQPSHLLVLFLVMTVLLRPVQMQATLASIA YPGPGFWFACYILFSVVSSFFLPRIFAGATLVYSSARDPSGMMSTVAAPLAPGSSNISQSVYLLGDLACFAVVAGLARLG YGRFIAQQLIVASIACFAFALIDLVSFQIGQAQLLDIIRNANYTMHTAETIHGFKRIVGPFPEASAYGAVALAYFAFTLM LWLERVQSRMAGLATLLIGPTIVLCTSTTAYVAGVFLVCMFVLFCLKRLIGGSATTPHMTFLAITLFFIPCAITALSLVP DAWNSIAGLLTTTVSDKLQSQSGEERTAWNTLALIAFVDTATFGAGLGTVRASSFIAALLSNVGLTGTALFAVFVYSLVR AAGRYKSGDRETHAIGTAAVMASIAQIGSAAISGSGTDLGLLFSTSAGLAVGCLAGAYVPRHRAASSPANRRPLEASASP LRAPMYSAP
Sequences:
>Translated_489_residues MSIEPIGFVVLLLGVLSMLNGARFAITALCLSTLLGAAAALQLPALGGSSIQPSHLLVLFLVMTVLLRPVQMQATLASIA YPGPGFWFACYILFSVVSSFFLPRIFAGATLVYSSARDPSGMMSTVAAPLAPGSSNISQSVYLLGDLACFAVVAGLARLG YGRFIAQQLIVASIACFAFALIDLVSFQIGQAQLLDIIRNANYTMHTAETIHGFKRIVGPFPEASAYGAVALAYFAFTLM LWLERVQSRMAGLATLLIGPTIVLCTSTTAYVAGVFLVCMFVLFCLKRLIGGSATTPHMTFLAITLFFIPCAITALSLVP DAWNSIAGLLTTTVSDKLQSQSGEERTAWNTLALIAFVDTATFGAGLGTVRASSFIAALLSNVGLTGTALFAVFVYSLVR AAGRYKSGDRETHAIGTAAVMASIAQIGSAAISGSGTDLGLLFSTSAGLAVGCLAGAYVPRHRAASSPANRRPLEASASP LRAPMYSAP >Mature_488_residues SIEPIGFVVLLLGVLSMLNGARFAITALCLSTLLGAAAALQLPALGGSSIQPSHLLVLFLVMTVLLRPVQMQATLASIAY PGPGFWFACYILFSVVSSFFLPRIFAGATLVYSSARDPSGMMSTVAAPLAPGSSNISQSVYLLGDLACFAVVAGLARLGY GRFIAQQLIVASIACFAFALIDLVSFQIGQAQLLDIIRNANYTMHTAETIHGFKRIVGPFPEASAYGAVALAYFAFTLML WLERVQSRMAGLATLLIGPTIVLCTSTTAYVAGVFLVCMFVLFCLKRLIGGSATTPHMTFLAITLFFIPCAITALSLVPD AWNSIAGLLTTTVSDKLQSQSGEERTAWNTLALIAFVDTATFGAGLGTVRASSFIAALLSNVGLTGTALFAVFVYSLVRA AGRYKSGDRETHAIGTAAVMASIAQIGSAAISGSGTDLGLLFSTSAGLAVGCLAGAYVPRHRAASSPANRRPLEASASPL RAPMYSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51004; Mature: 50873
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEPIGFVVLLLGVLSMLNGARFAITALCLSTLLGAAAALQLPALGGSSIQPSHLLVLF CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LVMTVLLRPVQMQATLASIAYPGPGFWFACYILFSVVSSFFLPRIFAGATLVYSSARDPS HHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC GMMSTVAAPLAPGSSNISQSVYLLGDLACFAVVAGLARLGYGRFIAQQLIVASIACFAFA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDLVSFQIGQAQLLDIIRNANYTMHTAETIHGFKRIVGPFPEASAYGAVALAYFAFTLM HHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LWLERVQSRMAGLATLLIGPTIVLCTSTTAYVAGVFLVCMFVLFCLKRLIGGSATTPHMT HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FLAITLFFIPCAITALSLVPDAWNSIAGLLTTTVSDKLQSQSGEERTAWNTLALIAFVDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATFGAGLGTVRASSFIAALLSNVGLTGTALFAVFVYSLVRAAGRYKSGDRETHAIGTAAV HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MASIAQIGSAAISGSGTDLGLLFSTSAGLAVGCLAGAYVPRHRAASSPANRRPLEASASP HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC LRAPMYSAP CCCCCCCCC >Mature Secondary Structure SIEPIGFVVLLLGVLSMLNGARFAITALCLSTLLGAAAALQLPALGGSSIQPSHLLVLF CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LVMTVLLRPVQMQATLASIAYPGPGFWFACYILFSVVSSFFLPRIFAGATLVYSSARDPS HHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC GMMSTVAAPLAPGSSNISQSVYLLGDLACFAVVAGLARLGYGRFIAQQLIVASIACFAFA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIDLVSFQIGQAQLLDIIRNANYTMHTAETIHGFKRIVGPFPEASAYGAVALAYFAFTLM HHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LWLERVQSRMAGLATLLIGPTIVLCTSTTAYVAGVFLVCMFVLFCLKRLIGGSATTPHMT HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FLAITLFFIPCAITALSLVPDAWNSIAGLLTTTVSDKLQSQSGEERTAWNTLALIAFVDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATFGAGLGTVRASSFIAALLSNVGLTGTALFAVFVYSLVRAAGRYKSGDRETHAIGTAAV HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MASIAQIGSAAISGSGTDLGLLFSTSAGLAVGCLAGAYVPRHRAASSPANRRPLEASASP HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC LRAPMYSAP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA