Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is ydjH [C]
Identifier: 209550701
GI number: 209550701
Start: 3194848
End: 3195777
Strand: Direct
Name: ydjH [C]
Synonym: Rleg2_3125
Alternate gene names: 209550701
Gene position: 3194848-3195777 (Clockwise)
Preceding gene: 209550700
Following gene: 209550702
Centisome position: 70.4
GC content: 65.7
Gene sequence:
>930_bases ATGCGGCCGCTTGCAGTCATCGGCAACGTCAATGTCGACCTCATCCTCGGACCGGCCGCCCCCTGGCCGAAAGCCGGGAC GGAAATCATCGTCGATCATGACGAGCTCAGGGTCGGCGGATCGGCCGGCAACAGCGCGCTCGCCTGGCAGGCGCTCGGCA TCGAATTCGACATCGCCGCCAATATCGGCAGCGATCAGTTCGGCCGCTGGCTCGCCGAAGCCTTCGGCCAGCGTTCTGAG AACTGGCCGGTCCGTCCTGAGAAGACGACGCTCTCCGTCGGCATCACCCATCCGGACGGCGAGCGCACCTTCTTCACGAC GACGGGCCATCTGCCGCGCTTCAGCCTCGCCGATGTCTTCGCCGTCATCGACGGCTTAAGGCTCCGGGGCGGTTACGCGC TTCTCTGCGGCGCTTTCCTGACCGACGATCTGACGAGAGAATACGACCCCCTCTTCGACTGGGCCGATAGCCATGACATC ACCGTCGCGCTCGACACCGGCTGGCCGCTCGACGGCTGGACGGAAGAGAACTGCGCGGCGACACGCGCCTGGCTCTCCCG CTCCGGCATCGCGCTGCTGAACGAGGTCGAGACGACAACACTTGCCGGCATTGCCGATCCGATCAAGGCTGCCCACGAAA TCAGGTCGCACATGCCGGAAGGCGCGATTATCGTCGTCAAACGCGGCCCGGATGGCGCCATCGCCATCGGGCCGGATGGC CTGTTGGTTTCGGTGGAGGCACCCCTCGTCACGGTCGTCGATACGATCGGCGCCGGCGATGTCTTCAACGCCGCTTTCCT CGCCGCGCTCGCAAAGGACGAACCTCTGCTTTCCTGCCTGACGGCGGGAACCGAGGTCGCCTCGCGCGCCATTTCCACCC TGCCCCGCAGCTACGGGGGCCCGACATCCGTAGAGGAGGTCGTGTCATGA
Upstream 100 bases:
>100_bases GCTGCCGATCGCCCAGCGGCTGATGATCGCCTTTGCCGACGCCCGCGTGGAAAATGCCGGAACGCCGGTCCGTTCCACCA AGATTACCCGGAGTGAATGA
Downstream 100 bases:
>100_bases GCGCGCTCGACATCCAGAACATCCGCAAGACCTATGGCGAGATCGAGACGCTGAAAGGCATCGACATCTCGCTGGAAAGC GGCGAATTCCTCGTGCTGCT
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; Sugar Kinase Protein; Ribokinase; Kinase; PfkB Domain-Containing Protein; ATP-Dependent Phosphofructokinase; Argininosuccinate Lyase; PfkB-Family Protein Carbohydrate Kinase
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRPLAVIGNVNVDLILGPAAPWPKAGTEIIVDHDELRVGGSAGNSALAWQALGIEFDIAANIGSDQFGRWLAEAFGQRSE NWPVRPEKTTLSVGITHPDGERTFFTTTGHLPRFSLADVFAVIDGLRLRGGYALLCGAFLTDDLTREYDPLFDWADSHDI TVALDTGWPLDGWTEENCAATRAWLSRSGIALLNEVETTTLAGIADPIKAAHEIRSHMPEGAIIVVKRGPDGAIAIGPDG LLVSVEAPLVTVVDTIGAGDVFNAAFLAALAKDEPLLSCLTAGTEVASRAISTLPRSYGGPTSVEEVVS
Sequences:
>Translated_309_residues MRPLAVIGNVNVDLILGPAAPWPKAGTEIIVDHDELRVGGSAGNSALAWQALGIEFDIAANIGSDQFGRWLAEAFGQRSE NWPVRPEKTTLSVGITHPDGERTFFTTTGHLPRFSLADVFAVIDGLRLRGGYALLCGAFLTDDLTREYDPLFDWADSHDI TVALDTGWPLDGWTEENCAATRAWLSRSGIALLNEVETTTLAGIADPIKAAHEIRSHMPEGAIIVVKRGPDGAIAIGPDG LLVSVEAPLVTVVDTIGAGDVFNAAFLAALAKDEPLLSCLTAGTEVASRAISTLPRSYGGPTSVEEVVS >Mature_309_residues MRPLAVIGNVNVDLILGPAAPWPKAGTEIIVDHDELRVGGSAGNSALAWQALGIEFDIAANIGSDQFGRWLAEAFGQRSE NWPVRPEKTTLSVGITHPDGERTFFTTTGHLPRFSLADVFAVIDGLRLRGGYALLCGAFLTDDLTREYDPLFDWADSHDI TVALDTGWPLDGWTEENCAATRAWLSRSGIALLNEVETTTLAGIADPIKAAHEIRSHMPEGAIIVVKRGPDGAIAIGPDG LLVSVEAPLVTVVDTIGAGDVFNAAFLAALAKDEPLLSCLTAGTEVASRAISTLPRSYGGPTSVEEVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32692; Mature: 32692
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLAVIGNVNVDLILGPAAPWPKAGTEIIVDHDELRVGGSAGNSALAWQALGIEFDIAA CCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCCEEECCCCCCCEEEEEEECEEEEEEE NIGSDQFGRWLAEAFGQRSENWPVRPEKTTLSVGITHPDGERTFFTTTGHLPRFSLADVF CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHH AVIDGLRLRGGYALLCGAFLTDDLTREYDPLFDWADSHDITVALDTGWPLDGWTEENCAA HHHHCEEECCCHHEEHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCCCCCCHHHH TRAWLSRSGIALLNEVETTTLAGIADPIKAAHEIRSHMPEGAIIVVKRGPDGAIAIGPDG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCC LLVSVEAPLVTVVDTIGAGDVFNAAFLAALAKDEPLLSCLTAGTEVASRAISTLPRSYGG EEEEECCCEEEEEHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PTSVEEVVS CCCHHHHCC >Mature Secondary Structure MRPLAVIGNVNVDLILGPAAPWPKAGTEIIVDHDELRVGGSAGNSALAWQALGIEFDIAA CCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCCEEECCCCCCCEEEEEEECEEEEEEE NIGSDQFGRWLAEAFGQRSENWPVRPEKTTLSVGITHPDGERTFFTTTGHLPRFSLADVF CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHH AVIDGLRLRGGYALLCGAFLTDDLTREYDPLFDWADSHDITVALDTGWPLDGWTEENCAA HHHHCEEECCCHHEEHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCCCCCCCCHHHH TRAWLSRSGIALLNEVETTTLAGIADPIKAAHEIRSHMPEGAIIVVKRGPDGAIAIGPDG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCC LLVSVEAPLVTVVDTIGAGDVFNAAFLAALAKDEPLLSCLTAGTEVASRAISTLPRSYGG EEEEECCCEEEEEHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PTSVEEVVS CCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA