Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is dht [H]
Identifier: 209550614
GI number: 209550614
Start: 3097293
End: 3098747
Strand: Direct
Name: dht [H]
Synonym: Rleg2_3038
Alternate gene names: 209550614
Gene position: 3097293-3098747 (Clockwise)
Preceding gene: 209550613
Following gene: 209550616
Centisome position: 68.25
GC content: 63.23
Gene sequence:
>1455_bases ATGAGCACAGTCATCAAAAACGGCACCATCGTCACCGCCGACCTGACCTACAAGGCTGACGTCAAGATCGACGGCGGCAA GATCGTCGAGATCGGCCCGAACCTCTCGGGCGACGAGACGCTGGACGCCTCCGGCTGTTATGTCATGCCTGGTGGTATCG ATCCGCACACCCATCTCGAAATGCCCTTCATGGGCACCTATTCCTCCGACGATTTCGAGAGCGGCACGCGGGCGGCCCTT TCCGGCGGCACCACCATGGTGGTCGATTTCGCCCTGCCCGCCCCCGGCCAGTCGCTGCTCGAAGCGCTGGCCATGTGGGA TAACAAGTCGACGCGGGCCAATTGCGACTATTCTTTCCACATGGCGGTTACCTGGTGGAGCGAGCAGGTCTTCCAGGAGA TGGAGACCATCGTCCGCGACAAGGGCATCAACACCTTCAAGCACTTCATGGCCTATAAGGGCGCGCTGATGGTCGACGAC GACGAGATGTTCGCCTCGTTCCAGCGCTGCGCCGAACTCGGCGCGCTGCCGCTGGTGCACGCCGAAAACGGCGATGTCGT CGCCTCGATGTCGGCAAAGCTGCTCGCCGAAGGCAACAACGGTCCCGAGGCGCATGCCTATTCCCGCCCTGCCGAGGTAG AGGGCGAGGCCACCAACCGCGCCATCATGATCGCCGACATGGCCGGCTGCCCGGTCTATATCGTCCATACCTCCTGCGAG CAGGCGCATGAAGCGATCCGCCGGGCCCGTGCCAAGGGCATGCGTGTCTACGGCGAACCGCTGATCCAGCACCTGACGCT CGACGAGAGCGAATATTCCAATCCAGACTGGGACCACGCCGCCCGCCGCGTGATGTCACCGCCGTTCCGCAACAAGCAGC ACCAGGACAGTCTCTGGGCCGGGCTTGCCTCCGGCTCGCTGCAGGTGGTCGCTACCGACCATTGCGCCTTCACCACGGCG CAGAAGCGTTTCGGCGTCGGTGATTTCACCAAGATCCCGAACGGCACCGGCGGCCTTGAAGACCGCATGCCGATGCTCTG GACACGCGGCGTCAACACCGGCCGGCTGACGATGAACGAGTTCGTCGCCGTGACCTCGACCAACATCGCCAAGATCCTCA ACATCTATCCGAAGAAAGGCGCGATCCTCGTCGGCGCCGATGCCGATATCGTCGTCTGGGATCCGAAGCGGTCAAAAACC ATCTCGTCCAAGAGCCAGCAGTCGGCGATCGACTACAACGTCTTCGAAGGCAAGGAAGTGACCGGCCTGCCGCGCTACAC GCTGACGCGCGGCGTCGTCGCTATCGAGGAAAGCACCATCAAGACCCAAGAGGGCCATGGTGAATTCGTCCGGCGCGAAC CGGTGACGGCCGTCAGCAGGGCACTCTCCACCTGGAAGGAGATCACCGCCCCGCGCAAGGTGACGCGCAGCGGCATTCCG GCGACCGGCGTTTGA
Upstream 100 bases:
>100_bases TGCCTCAATGGCCTCAATTCATGCGCGGTTGCATCCGCTATCGTCAGTCATTGGATAAACAGCTTGCGCAGGCACCGCGC AGCGACAGGGAGTTCGGAGA
Downstream 100 bases:
>100_bases CGATGTTCCATGACCAACCGGCCATCAACCGGAGAACGGCGCCTTCATGTCGATGACCTCATGCCGGCACCAGCGCATCC AACTCCGGCAGCAGCACGAC
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSTVIKNGTIVTADLTYKADVKIDGGKIVEIGPNLSGDETLDASGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAAL SGGTTMVVDFALPAPGQSLLEALAMWDNKSTRANCDYSFHMAVTWWSEQVFQEMETIVRDKGINTFKHFMAYKGALMVDD DEMFASFQRCAELGALPLVHAENGDVVASMSAKLLAEGNNGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE QAHEAIRRARAKGMRVYGEPLIQHLTLDESEYSNPDWDHAARRVMSPPFRNKQHQDSLWAGLASGSLQVVATDHCAFTTA QKRFGVGDFTKIPNGTGGLEDRMPMLWTRGVNTGRLTMNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKT ISSKSQQSAIDYNVFEGKEVTGLPRYTLTRGVVAIEESTIKTQEGHGEFVRREPVTAVSRALSTWKEITAPRKVTRSGIP ATGV
Sequences:
>Translated_484_residues MSTVIKNGTIVTADLTYKADVKIDGGKIVEIGPNLSGDETLDASGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAAL SGGTTMVVDFALPAPGQSLLEALAMWDNKSTRANCDYSFHMAVTWWSEQVFQEMETIVRDKGINTFKHFMAYKGALMVDD DEMFASFQRCAELGALPLVHAENGDVVASMSAKLLAEGNNGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE QAHEAIRRARAKGMRVYGEPLIQHLTLDESEYSNPDWDHAARRVMSPPFRNKQHQDSLWAGLASGSLQVVATDHCAFTTA QKRFGVGDFTKIPNGTGGLEDRMPMLWTRGVNTGRLTMNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKT ISSKSQQSAIDYNVFEGKEVTGLPRYTLTRGVVAIEESTIKTQEGHGEFVRREPVTAVSRALSTWKEITAPRKVTRSGIP ATGV >Mature_483_residues STVIKNGTIVTADLTYKADVKIDGGKIVEIGPNLSGDETLDASGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAALS GGTTMVVDFALPAPGQSLLEALAMWDNKSTRANCDYSFHMAVTWWSEQVFQEMETIVRDKGINTFKHFMAYKGALMVDDD EMFASFQRCAELGALPLVHAENGDVVASMSAKLLAEGNNGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCEQ AHEAIRRARAKGMRVYGEPLIQHLTLDESEYSNPDWDHAARRVMSPPFRNKQHQDSLWAGLASGSLQVVATDHCAFTTAQ KRFGVGDFTKIPNGTGGLEDRMPMLWTRGVNTGRLTMNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKTI SSKSQQSAIDYNVFEGKEVTGLPRYTLTRGVVAIEESTIKTQEGHGEFVRREPVTAVSRALSTWKEITAPRKVTRSGIPA TGV
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=460, Percent_Identity=49.3478260869565, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI4503379, Length=479, Percent_Identity=43.4237995824635, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI4503051, Length=455, Percent_Identity=45.2747252747253, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI4503377, Length=456, Percent_Identity=44.2982456140351, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI190194363, Length=455, Percent_Identity=45.4945054945055, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI62422571, Length=455, Percent_Identity=45.2747252747253, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI19923821, Length=481, Percent_Identity=42.8274428274428, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI18105007, Length=447, Percent_Identity=26.6219239373602, Blast_Score=98, Evalue=2e-20, Organism=Escherichia coli, GI87082175, Length=461, Percent_Identity=39.6963123644252, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI1786722, Length=440, Percent_Identity=27.5, Blast_Score=168, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17539558, Length=483, Percent_Identity=46.9979296066253, Blast_Score=444, Evalue=1e-125, Organism=Caenorhabditis elegans, GI71989490, Length=455, Percent_Identity=45.9340659340659, Blast_Score=421, Evalue=1e-118, Organism=Caenorhabditis elegans, GI86575075, Length=456, Percent_Identity=32.4561403508772, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI193204318, Length=428, Percent_Identity=24.7663551401869, Blast_Score=91, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6322218, Length=403, Percent_Identity=26.7990074441687, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI221377917, Length=455, Percent_Identity=45.2747252747253, Blast_Score=421, Evalue=1e-118, Organism=Drosophila melanogaster, GI17137462, Length=453, Percent_Identity=44.1501103752759, Blast_Score=406, Evalue=1e-113, Organism=Drosophila melanogaster, GI24644287, Length=294, Percent_Identity=44.2176870748299, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI24644289, Length=258, Percent_Identity=44.5736434108527, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI24642586, Length=437, Percent_Identity=26.5446224256293, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI18859883, Length=419, Percent_Identity=22.1957040572792, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 52764; Mature: 52633
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIKNGTIVTADLTYKADVKIDGGKIVEIGPNLSGDETLDASGCYVMPGGIDPHTHLE CCCEEECCEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEC MPFMGTYSSDDFESGTRAALSGGTTMVVDFALPAPGQSLLEALAMWDNKSTRANCDYSFH CCEECCCCCCCCCCCCHHEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE MAVTWWSEQVFQEMETIVRDKGINTFKHFMAYKGALMVDDDEMFASFQRCAELGALPLVH EEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEE AENGDVVASMSAKLLAEGNNGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE CCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHH QAHEAIRRARAKGMRVYGEPLIQHLTLDESEYSNPDWDHAARRVMSPPFRNKQHQDSLWA HHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHH GLASGSLQVVATDHCAFTTAQKRFGVGDFTKIPNGTGGLEDRMPMLWTRGVNTGRLTMNE HHCCCCEEEEEECCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHH FVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKTISSKSQQSAIDYNVFEGKEV EEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHCCCCEEEECCCCC TGLPRYTLTRGVVAIEESTIKTQEGHGEFVRREPVTAVSRALSTWKEITAPRKVTRSGIP CCCCCHHHHCCEEEEECCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCC ATGV CCCC >Mature Secondary Structure STVIKNGTIVTADLTYKADVKIDGGKIVEIGPNLSGDETLDASGCYVMPGGIDPHTHLE CCEEECCEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEC MPFMGTYSSDDFESGTRAALSGGTTMVVDFALPAPGQSLLEALAMWDNKSTRANCDYSFH CCEECCCCCCCCCCCCHHEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE MAVTWWSEQVFQEMETIVRDKGINTFKHFMAYKGALMVDDDEMFASFQRCAELGALPLVH EEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEE AENGDVVASMSAKLLAEGNNGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE CCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHH QAHEAIRRARAKGMRVYGEPLIQHLTLDESEYSNPDWDHAARRVMSPPFRNKQHQDSLWA HHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHH GLASGSLQVVATDHCAFTTAQKRFGVGDFTKIPNGTGGLEDRMPMLWTRGVNTGRLTMNE HHCCCCEEEEEECCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHH FVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKTISSKSQQSAIDYNVFEGKEV EEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHCCCCEEEECCCCC TGLPRYTLTRGVVAIEESTIKTQEGHGEFVRREPVTAVSRALSTWKEITAPRKVTRSGIP CCCCCHHHHCCEEEEECCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCCC ATGV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]