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The map label for this gene is yibD [C]

Identifier: 209550528

GI number: 209550528

Start: 3010692

End: 3011765

Strand: Direct

Name: yibD [C]

Synonym: Rleg2_2951

Alternate gene names: 209550528

Gene position: 3010692-3011765 (Clockwise)

Preceding gene: 209550527

Following gene: 209550529

Centisome position: 66.34

GC content: 58.94

Gene sequence:

>1074_bases
ATGACTGCCACAGCCGCCCCATTGATCACAGTCGTCATACCGGCCTACAACGCCGAGAAGACACTTGTGGAAACATTGGG
CAGCGTCTCCAACCAATCCTACGACAAGCTCGAGATCCTCGTGATCGACGACGGATCGCGGGATGGTACTTTCGATCTTG
CGCGCGACTGCGGCCTGGGCGATCGCCGTGTCCGTGTTCTCCGCCAGGAAAATGGCGGCGTTGCGCGTGCCCGCAACCAT
GGCATCAGGGAGGCGCGCGGCCTCTATATCGCCCCCGTCGATGCCGATGACGTGTGGCATCCCGAGAAAATTGAACTCCA
GCTTCAGGCGCTCAGGAAATTTCCAAACGGACACGGGGTCGCCTACAACTGGTATGCGGCGATCGACGAAAACGGCATTA
TTTTCGGCCATTCGCGCCCGGTCATGCATGAAGGAAATATCTTCGAACCTTTACTGAGGGAAAACTTCATCGGCAATGGC
AGCACGCCCTTGATGCCGCGGGCGGAGATCCTTGCGTGCGGCGGCTATGACGCTGGCCTGCGCGACAGCGGCGCCGAGGG
GTGCGAAGATCTGAAACTCTATCTCGCCCTGGCCGAGACATTGCCCTTCGCGCTGGTTCCGGACTTCCTCACAGGTTACC
GCTTTACCAAGGGAAACATGTCCAGCAACGCCTATCGGATGCTGAAATCCCACGCTTTGGTGATGGCCCCTATCATCGCC
CGTCATCCCCGTCTTGAGCGCGATATCCGGACAGCCGAATTCAACACCGCGCGCTGGTATTTCAAGAAGGCCTTTTTTGA
CGCGGACTATGCTCAGCTCAAAAAGTTGGCACCGATGATGGCGAGAAAATACACCCCGCAGCTGATCGTCCATGGCATAC
AGGATAGCTGGCGCCGGGCCAAACGCCAGGGCATCGGGATGGCAAGGCGCGCTTTGGGCAAACCCCTGGTCCGGGCGAAC
CGCTTCGTTGCCGGCATTCCGCAGACCGGAACAGCATTCAGCGATCGCTTTACGAGCCTGCCCGTGAAGGACGCGATGAG
CCTCACTTCTTTCCGGGCAGCCGACCATGAATAG

Upstream 100 bases:

>100_bases
CTCTTCGCTCTGCCGCGCCTCGAAGTCCGCGGCGATCGTCCGCTTGACGCCTTCCCTGAACTCATGGGCCTGACGGGGGC
CTTTATCGGATGACACCGCC

Downstream 100 bases:

>100_bases
GTTCCGTAAACCCGCTTCCCCCAAGCCGGCAGGCGCTTACAACCTGATCGTTGCGGCGCGGTTCCGCGAGCTGCGGCAAC
TCGTCCCGGCGCTGCGGCTC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTATAAPLITVVIPAYNAEKTLVETLGSVSNQSYDKLEILVIDDGSRDGTFDLARDCGLGDRRVRVLRQENGGVARARNH
GIREARGLYIAPVDADDVWHPEKIELQLQALRKFPNGHGVAYNWYAAIDENGIIFGHSRPVMHEGNIFEPLLRENFIGNG
STPLMPRAEILACGGYDAGLRDSGAEGCEDLKLYLALAETLPFALVPDFLTGYRFTKGNMSSNAYRMLKSHALVMAPIIA
RHPRLERDIRTAEFNTARWYFKKAFFDADYAQLKKLAPMMARKYTPQLIVHGIQDSWRRAKRQGIGMARRALGKPLVRAN
RFVAGIPQTGTAFSDRFTSLPVKDAMSLTSFRAADHE

Sequences:

>Translated_357_residues
MTATAAPLITVVIPAYNAEKTLVETLGSVSNQSYDKLEILVIDDGSRDGTFDLARDCGLGDRRVRVLRQENGGVARARNH
GIREARGLYIAPVDADDVWHPEKIELQLQALRKFPNGHGVAYNWYAAIDENGIIFGHSRPVMHEGNIFEPLLRENFIGNG
STPLMPRAEILACGGYDAGLRDSGAEGCEDLKLYLALAETLPFALVPDFLTGYRFTKGNMSSNAYRMLKSHALVMAPIIA
RHPRLERDIRTAEFNTARWYFKKAFFDADYAQLKKLAPMMARKYTPQLIVHGIQDSWRRAKRQGIGMARRALGKPLVRAN
RFVAGIPQTGTAFSDRFTSLPVKDAMSLTSFRAADHE
>Mature_356_residues
TATAAPLITVVIPAYNAEKTLVETLGSVSNQSYDKLEILVIDDGSRDGTFDLARDCGLGDRRVRVLRQENGGVARARNHG
IREARGLYIAPVDADDVWHPEKIELQLQALRKFPNGHGVAYNWYAAIDENGIIFGHSRPVMHEGNIFEPLLRENFIGNGS
TPLMPRAEILACGGYDAGLRDSGAEGCEDLKLYLALAETLPFALVPDFLTGYRFTKGNMSSNAYRMLKSHALVMAPIIAR
HPRLERDIRTAEFNTARWYFKKAFFDADYAQLKKLAPMMARKYTPQLIVHGIQDSWRRAKRQGIGMARRALGKPLVRANR
FVAGIPQTGTAFSDRFTSLPVKDAMSLTSFRAADHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=97, Percent_Identity=40.2061855670103, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39767; Mature: 39636

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATAAPLITVVIPAYNAEKTLVETLGSVSNQSYDKLEILVIDDGSRDGTFDLARDCGLG
CCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHCCCC
DRRVRVLRQENGGVARARNHGIREARGLYIAPVDADDVWHPEKIELQLQALRKFPNGHGV
HHHHHEEECCCCCEEHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE
AYNWYAAIDENGIIFGHSRPVMHEGNIFEPLLRENFIGNGSTPLMPRAEILACGGYDAGL
EEEEEEEECCCCEEEECCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
RDSGAEGCEDLKLYLALAETLPFALVPDFLTGYRFTKGNMSSNAYRMLKSHALVMAPIIA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RHPRLERDIRTAEFNTARWYFKKAFFDADYAQLKKLAPMMARKYTPQLIVHGIQDSWRRA
CCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KRQGIGMARRALGKPLVRANRFVAGIPQTGTAFSDRFTSLPVKDAMSLTSFRAADHE
HHHCCHHHHHHHCCHHHHHCCEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TATAAPLITVVIPAYNAEKTLVETLGSVSNQSYDKLEILVIDDGSRDGTFDLARDCGLG
CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHCCCC
DRRVRVLRQENGGVARARNHGIREARGLYIAPVDADDVWHPEKIELQLQALRKFPNGHGV
HHHHHEEECCCCCEEHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE
AYNWYAAIDENGIIFGHSRPVMHEGNIFEPLLRENFIGNGSTPLMPRAEILACGGYDAGL
EEEEEEEECCCCEEEECCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
RDSGAEGCEDLKLYLALAETLPFALVPDFLTGYRFTKGNMSSNAYRMLKSHALVMAPIIA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RHPRLERDIRTAEFNTARWYFKKAFFDADYAQLKKLAPMMARKYTPQLIVHGIQDSWRRA
CCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KRQGIGMARRALGKPLVRANRFVAGIPQTGTAFSDRFTSLPVKDAMSLTSFRAADHE
HHHCCHHHHHHHCCHHHHHCCEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]