Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is yhaZ [H]
Identifier: 209550472
GI number: 209550472
Start: 2946000
End: 2947103
Strand: Direct
Name: yhaZ [H]
Synonym: Rleg2_2895
Alternate gene names: 209550472
Gene position: 2946000-2947103 (Clockwise)
Preceding gene: 209550471
Following gene: 209550473
Centisome position: 64.92
GC content: 64.95
Gene sequence:
>1104_bases ATGCCGGAACCGCTCAAGAACCTGCTGCACGAGGCGCTGGTCGGCGACATGGCCGATCGCATCGCTGCCAATGCGCCCAC CTTCGACAGCAGCCGTTTCGTGGCGCTGGCGACCGATGGCCTCGGGGCGCTGGAGTTGATGGAACGCTCGGCCCTGATCC GCGACGCGCTGTTTGCCACGCTTCCCGATGATTTTACGCAGGCCGCCGCCATCCTGAAGGCGAGCCTGCCTGCGCCAGGC AGGCCGGGGCTGACCGGCTGGATGCTGCTGCCGGTCAACCAGTTCATCGCGGCCCGCGGCCCCGATCATTTCGATCTCGG CCTCGATCTGCTGAAGGCGCTGACGCCGCATTTCACCGCCGAATATGGCATCCGCCAATTCATCCACCGCGACCAGCAGC GCGCGCTCGCCATCATCTCCCACTGGGTTGCCGATCCCGATCAGCACGTGCGCCGGCTGGCAAGCGAGGGAACGCGGCCG CGCCTGCCCTGGGCCATGCGCCTGCCGCAGCTTGTGAAGGATCCGGCGCCGATCCTGCCGATCCTGACTGCATTGACCGA TGATCCGGAGGATTATGTCCGCCGCTCCGTCGCCAACAGTCTCAACGACATCGCCAAGGATCACCCGGATCTGGTCGCCG CCTTCATCGCCGGCCATATCGAGGGGGCGTCGCCCGAGCGGCGGCGCCTGCTGAAGCACGCCTCGCGCACGCTCTTGAAG AACGGCCATGCGCAAGCGCTCGCCAATTTTGGCTTCGGCGCGGCGACCGCGCTGACATGTGAACTGCGCCTCGTGAACGG CGAGGTCACATTCGGCGAAGGACTGGATTTCGAAATCCGCGTCATGAATGCCGGCGAGACCACGCAATCGCTGATGATCG ACTACGCCATCCATCACGTGAAGGCCGACGGCTCGCTCTCTCCCAAGGTCTTCAAATGCAAGACGATCATGCTCGCGCCC GGGCAAAGCCACGCAATCGAGCGCCGTCACGCCATGCGGCCGATCACCACGCGGCGCTATTACCCCGGCCAGCACCGCAT CGCCATCCTCGTCAACGGCTGGGAAAGCGCATCGCAAAGCTTCTTGCTCGTCATGCCAGACTAA
Upstream 100 bases:
>100_bases TCTTTCACGACGATCTCGCTATCGCGATGCGGTGCGCCGTCGTTAAACGGCTCTATCCAAACTTGACGTTCGCGGCCGCC AGATAGGTAGGAGGATCAGC
Downstream 100 bases:
>100_bases GTTCCACCGGAGGCTTTCTTGTGCACTGCACTTGACTTTCCGCGCGAACTAGCCCAAATGCATCCCAGCTTTCACCCTTC CGGCCGCCGCGTGAGCGTGC
Product: HEAT domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MPEPLKNLLHEALVGDMADRIAANAPTFDSSRFVALATDGLGALELMERSALIRDALFATLPDDFTQAAAILKASLPAPG RPGLTGWMLLPVNQFIAARGPDHFDLGLDLLKALTPHFTAEYGIRQFIHRDQQRALAIISHWVADPDQHVRRLASEGTRP RLPWAMRLPQLVKDPAPILPILTALTDDPEDYVRRSVANSLNDIAKDHPDLVAAFIAGHIEGASPERRRLLKHASRTLLK NGHAQALANFGFGAATALTCELRLVNGEVTFGEGLDFEIRVMNAGETTQSLMIDYAIHHVKADGSLSPKVFKCKTIMLAP GQSHAIERRHAMRPITTRRYYPGQHRIAILVNGWESASQSFLLVMPD
Sequences:
>Translated_367_residues MPEPLKNLLHEALVGDMADRIAANAPTFDSSRFVALATDGLGALELMERSALIRDALFATLPDDFTQAAAILKASLPAPG RPGLTGWMLLPVNQFIAARGPDHFDLGLDLLKALTPHFTAEYGIRQFIHRDQQRALAIISHWVADPDQHVRRLASEGTRP RLPWAMRLPQLVKDPAPILPILTALTDDPEDYVRRSVANSLNDIAKDHPDLVAAFIAGHIEGASPERRRLLKHASRTLLK NGHAQALANFGFGAATALTCELRLVNGEVTFGEGLDFEIRVMNAGETTQSLMIDYAIHHVKADGSLSPKVFKCKTIMLAP GQSHAIERRHAMRPITTRRYYPGQHRIAILVNGWESASQSFLLVMPD >Mature_366_residues PEPLKNLLHEALVGDMADRIAANAPTFDSSRFVALATDGLGALELMERSALIRDALFATLPDDFTQAAAILKASLPAPGR PGLTGWMLLPVNQFIAARGPDHFDLGLDLLKALTPHFTAEYGIRQFIHRDQQRALAIISHWVADPDQHVRRLASEGTRPR LPWAMRLPQLVKDPAPILPILTALTDDPEDYVRRSVANSLNDIAKDHPDLVAAFIAGHIEGASPERRRLLKHASRTLLKN GHAQALANFGFGAATALTCELRLVNGEVTFGEGLDFEIRVMNAGETTQSLMIDYAIHHVKADGSLSPKVFKCKTIMLAPG QSHAIERRHAMRPITTRRYYPGQHRIAILVNGWESASQSFLLVMPD
Specific function: Unknown
COG id: COG4335
COG function: function code L; DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HEAT repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 - InterPro: IPR021133 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 40373; Mature: 40242
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPLKNLLHEALVGDMADRIAANAPTFDSSRFVALATDGLGALELMERSALIRDALFAT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH LPDDFTQAAAILKASLPAPGRPGLTGWMLLPVNQFIAARGPDHFDLGLDLLKALTPHFTA CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHCCCHHH EYGIRQFIHRDQQRALAIISHWVADPDQHVRRLASEGTRPRLPWAMRLPQLVKDPAPILP HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCCCHHH ILTALTDDPEDYVRRSVANSLNDIAKDHPDLVAAFIAGHIEGASPERRRLLKHASRTLLK HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NGHAQALANFGFGAATALTCELRLVNGEVTFGEGLDFEIRVMNAGETTQSLMIDYAIHHV CCCHHHHHHCCCCCCEEEEEEEEEECCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHE KADGSLSPKVFKCKTIMLAPGQSHAIERRHAMRPITTRRYYPGQHRIAILVNGWESASQS ECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCC FLLVMPD EEEEECC >Mature Secondary Structure PEPLKNLLHEALVGDMADRIAANAPTFDSSRFVALATDGLGALELMERSALIRDALFAT CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH LPDDFTQAAAILKASLPAPGRPGLTGWMLLPVNQFIAARGPDHFDLGLDLLKALTPHFTA CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHCCCHHH EYGIRQFIHRDQQRALAIISHWVADPDQHVRRLASEGTRPRLPWAMRLPQLVKDPAPILP HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCCCHHH ILTALTDDPEDYVRRSVANSLNDIAKDHPDLVAAFIAGHIEGASPERRRLLKHASRTLLK HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NGHAQALANFGFGAATALTCELRLVNGEVTFGEGLDFEIRVMNAGETTQSLMIDYAIHHV CCCHHHHHHCCCCCCEEEEEEEEEECCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHE KADGSLSPKVFKCKTIMLAPGQSHAIERRHAMRPITTRRYYPGQHRIAILVNGWESASQS ECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCC FLLVMPD EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]