Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is kdgK [H]
Identifier: 209550419
GI number: 209550419
Start: 2890267
End: 2891187
Strand: Direct
Name: kdgK [H]
Synonym: Rleg2_2840
Alternate gene names: 209550419
Gene position: 2890267-2891187 (Clockwise)
Preceding gene: 209550418
Following gene: 209550421
Centisome position: 63.69
GC content: 64.06
Gene sequence:
>921_bases GTGAGCAGACGGTTTCTATCGATCGGTGAATGCATGGTGGAACTCTCGCAGGCAGGCGACGGCCTGCTACGCAAAGGTTT CGCCGGCGATACGTTCAACACCGCCTGGTATGCCCGCGCCTGCCTTGGCCCCGACTGGTCGGTTGACTATTTCACGGCGC TTGGCGATGACGCCATGTCGGATGAGATGGTGGCCTTCATCGACAAGGCGGGCATCGGCACGAGCCTCATCCGCCGCATC AGGGGCAAAACGCCCGGCCTTTACATGATCAATCTGAAGAACGGCGAGCGCTCCTTCAGCTACTGGCGCGACAGCTCGGC TGCCCGCAGCCTGGCCGCCGATCCCGACAGCCTGCGCGAGGCGGTGGAGAGCGCTGACCTCGTCTATTTCTCCGGCATCA CCCTTGCCATCCTGCCGCAGGAGGACGCCGCAACGCTGCTCGCCGAAATCCGCCGCGCCAAGGCCGCCGGCAAGCTCGTC GTGTTCGACCCGAACATCCGCCCTCGCCTGTGGTCGAGCTATGACATCATGCACGCGACGATCAGCGAGGGCGCACGCTC CTCCGTCCTCGTCATGCCGAGCTTCGACGACGAAGCCGCCCATTTCGGTGACGATTCCATTGAAGCGACGGTCCACCGCT ATCGCGCGCTGGGCGCTGTCCATATCGTCGTGAAGAATGGCGCGGCCGGGGTGAGGCTGAATTTCGCCGGCGAGGAGAGC TTCGTTCCGGCCGAGAAGGTCGAGCAAGTGGTCGATACCACCAGCGCCGGCGACAGCTTCAACGGCGCCTTCCTTGCGCA CTATCTGGAAACAGCGGATGCAACCGCCGCCGCCCGCTTCGCCGCAGGCGTCGCAGCCCGTGTCGTCAGCGAACACGGCG CATTGGTGGCAAAGGAAAAACTCGGATTGGACGGCGGCTAA
Upstream 100 bases:
>100_bases GGCTTTTTACCTCCTGCGATATCGGCATCCACGATATCAACGCTTGTCACTCCGTCTGGCTCCGCGTATCAGCGATGAAG AGCAGTGCCGGGAGGACAAG
Downstream 100 bases:
>100_bases GCCCGCGCATAAAAATTCGGTACGAATGCCACGTACGAGGCGTTTCCTGCCTTGTCGGCCTTCTGACCCGTTAAATGGGT AGGACCTCAGGACTTCGTCG
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSRRFLSIGECMVELSQAGDGLLRKGFAGDTFNTAWYARACLGPDWSVDYFTALGDDAMSDEMVAFIDKAGIGTSLIRRI RGKTPGLYMINLKNGERSFSYWRDSSAARSLAADPDSLREAVESADLVYFSGITLAILPQEDAATLLAEIRRAKAAGKLV VFDPNIRPRLWSSYDIMHATISEGARSSVLVMPSFDDEAAHFGDDSIEATVHRYRALGAVHIVVKNGAAGVRLNFAGEES FVPAEKVEQVVDTTSAGDSFNGAFLAHYLETADATAAARFAAGVAARVVSEHGALVAKEKLGLDGG
Sequences:
>Translated_306_residues MSRRFLSIGECMVELSQAGDGLLRKGFAGDTFNTAWYARACLGPDWSVDYFTALGDDAMSDEMVAFIDKAGIGTSLIRRI RGKTPGLYMINLKNGERSFSYWRDSSAARSLAADPDSLREAVESADLVYFSGITLAILPQEDAATLLAEIRRAKAAGKLV VFDPNIRPRLWSSYDIMHATISEGARSSVLVMPSFDDEAAHFGDDSIEATVHRYRALGAVHIVVKNGAAGVRLNFAGEES FVPAEKVEQVVDTTSAGDSFNGAFLAHYLETADATAAARFAAGVAARVVSEHGALVAKEKLGLDGG >Mature_305_residues SRRFLSIGECMVELSQAGDGLLRKGFAGDTFNTAWYARACLGPDWSVDYFTALGDDAMSDEMVAFIDKAGIGTSLIRRIR GKTPGLYMINLKNGERSFSYWRDSSAARSLAADPDSLREAVESADLVYFSGITLAILPQEDAATLLAEIRRAKAAGKLVV FDPNIRPRLWSSYDIMHATISEGARSSVLVMPSFDDEAAHFGDDSIEATVHRYRALGAVHIVVKNGAAGVRLNFAGEESF VPAEKVEQVVDTTSAGDSFNGAFLAHYLETADATAAARFAAGVAARVVSEHGALVAKEKLGLDGG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=308, Percent_Identity=37.3376623376623, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 32796; Mature: 32665
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRFLSIGECMVELSQAGDGLLRKGFAGDTFNTAWYARACLGPDWSVDYFTALGDDAMS CCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCC DEMVAFIDKAGIGTSLIRRIRGKTPGLYMINLKNGERSFSYWRDSSAARSLAADPDSLRE CHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCHHHHHHCCCHHHHHH AVESADLVYFSGITLAILPQEDAATLLAEIRRAKAAGKLVVFDPNIRPRLWSSYDIMHAT HHHHCCEEEECCEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH ISEGARSSVLVMPSFDDEAAHFGDDSIEATVHRYRALGAVHIVVKNGAAGVRLNFAGEES HHCCCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCC FVPAEKVEQVVDTTSAGDSFNGAFLAHYLETADATAAARFAAGVAARVVSEHGALVAKEK CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEHHH LGLDGG CCCCCC >Mature Secondary Structure SRRFLSIGECMVELSQAGDGLLRKGFAGDTFNTAWYARACLGPDWSVDYFTALGDDAMS CCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCC DEMVAFIDKAGIGTSLIRRIRGKTPGLYMINLKNGERSFSYWRDSSAARSLAADPDSLRE CHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCHHHHHHCCCHHHHHH AVESADLVYFSGITLAILPQEDAATLLAEIRRAKAAGKLVVFDPNIRPRLWSSYDIMHAT HHHHCCEEEECCEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH ISEGARSSVLVMPSFDDEAAHFGDDSIEATVHRYRALGAVHIVVKNGAAGVRLNFAGEES HHCCCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCC FVPAEKVEQVVDTTSAGDSFNGAFLAHYLETADATAAARFAAGVAARVVSEHGALVAKEK CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEHHH LGLDGG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157608 [H]