Click here to switch to the map view.

The map label for this gene is 209550382

Identifier: 209550382

GI number: 209550382

Start: 2847144

End: 2847986

Strand: Direct

Name: 209550382

Synonym: Rleg2_2803

Alternate gene names: NA

Gene position: 2847144-2847986 (Clockwise)

Preceding gene: 209550381

Following gene: 209550386

Centisome position: 62.74

GC content: 66.43

Gene sequence:

>843_bases
TTGCTCGATCTTAGGAAATTGCCGCTCGAAGCCCAGCTTACCGCCCTTCTCGATGGCGAGGTCTCGCCCGAACAGCGCCA
CGAACTGGAGCAGCGCCTGGCAACCGACGAGAATGCGCGCCGGCTGCACGAGAAGCTGCGCCATGGCGCCGATTTCGGCC
GCCGCCGTCTCGACGACATCCTGAAGGAGCCGGTGCCGCTCGCCCTCGTCCGCTCGATCAAGAGCACGCAGCCGCCGAAG
ACGCCGATCGCCCAGCGCGCCACGCGCCCGCCGGTAAAACTGGCGCCGAGCGGCCCGCAGGCGCTGGCCGCCGCCCTTAT
CCTCTTCGCCGTTGGTTGCGGTATCGGCTATTTCGTCGGCATCAGCCCGGATGCCGACGAAATCGCCACAACGACCTCCG
CGACGGCACCGGCCAATACCAGCGACTGGCTGGGCGACGTCACCGCCTATCAGCGCCTGCTGATCCGTCAGCCCCGTCAT
CTCGTCGAAGTGCCCGCCTCGCAGGCCGAGGAAATCTCCAGCTGGCTGACGACCGCGATCGGCGTGCCCTTCCGCGTGCC
TGATCTCAGCGCCGAAGCCTGGACCTTCCAGGGCGCGCGCGTCATCCTCGGCGACAGCCGCCCTGTCGGCCAGCTCGTCT
ATTCCAACGCAGACGGCGATGTCATCTCCATCTGCTTCCGCAAGGACGCGCAGCCACCGGAGACCGACGACTTCAAGGAA
ACCATCAAGGACGAGATCGGTCTCGTGACATGGCACAATGCCGGCACGTCCTACGTGCTTGCCGGCCCTTCCGCCGAAGC
GGCGCTCGGCCAGCTCGCCATGAAAATCGCCACGGCGATTTGA

Upstream 100 bases:

>100_bases
ATCATGGGCACGCCGGTGGCAAATGTCGTCTCGCAGCTCGCGACCGCAAGGCTGCATTTTGCCGGGCTTGCCGGCACCCA
CCCGATCCACAGGTACTGAA

Downstream 100 bases:

>100_bases
TGACCGCCAGCGGAGCTGAGGCGGCACCATGGCAAAATCGACTATCAGCGCCAGCCGCCCCCTCATCCGACCCTGCGGGC
CACCTTCTCCCCGCTGGGGA

Product: transmembrane anti-sigma factor

Products: NA

Alternate protein names: Anti-Sigma Factor; Transmembrane Anti-Sigma Factor; Transmembrane Protein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLDLRKLPLEAQLTALLDGEVSPEQRHELEQRLATDENARRLHEKLRHGADFGRRRLDDILKEPVPLALVRSIKSTQPPK
TPIAQRATRPPVKLAPSGPQALAAALILFAVGCGIGYFVGISPDADEIATTTSATAPANTSDWLGDVTAYQRLLIRQPRH
LVEVPASQAEEISSWLTTAIGVPFRVPDLSAEAWTFQGARVILGDSRPVGQLVYSNADGDVISICFRKDAQPPETDDFKE
TIKDEIGLVTWHNAGTSYVLAGPSAEAALGQLAMKIATAI

Sequences:

>Translated_280_residues
MLDLRKLPLEAQLTALLDGEVSPEQRHELEQRLATDENARRLHEKLRHGADFGRRRLDDILKEPVPLALVRSIKSTQPPK
TPIAQRATRPPVKLAPSGPQALAAALILFAVGCGIGYFVGISPDADEIATTTSATAPANTSDWLGDVTAYQRLLIRQPRH
LVEVPASQAEEISSWLTTAIGVPFRVPDLSAEAWTFQGARVILGDSRPVGQLVYSNADGDVISICFRKDAQPPETDDFKE
TIKDEIGLVTWHNAGTSYVLAGPSAEAALGQLAMKIATAI
>Mature_280_residues
MLDLRKLPLEAQLTALLDGEVSPEQRHELEQRLATDENARRLHEKLRHGADFGRRRLDDILKEPVPLALVRSIKSTQPPK
TPIAQRATRPPVKLAPSGPQALAAALILFAVGCGIGYFVGISPDADEIATTTSATAPANTSDWLGDVTAYQRLLIRQPRH
LVEVPASQAEEISSWLTTAIGVPFRVPDLSAEAWTFQGARVILGDSRPVGQLVYSNADGDVISICFRKDAQPPETDDFKE
TIKDEIGLVTWHNAGTSYVLAGPSAEAALGQLAMKIATAI

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30295; Mature: 30295

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLRKLPLEAQLTALLDGEVSPEQRHELEQRLATDENARRLHEKLRHGADFGRRRLDDI
CCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKEPVPLALVRSIKSTQPPKTPIAQRATRPPVKLAPSGPQALAAALILFAVGCGIGYFVG
HHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHEEEE
ISPDADEIATTTSATAPANTSDWLGDVTAYQRLLIRQPRHLVEVPASQAEEISSWLTTAI
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH
GVPFRVPDLSAEAWTFQGARVILGDSRPVGQLVYSNADGDVISICFRKDAQPPETDDFKE
CCCEECCCCCCCCEEECCCEEEEECCCCHHHHEEECCCCCEEEEEECCCCCCCCCHHHHH
TIKDEIGLVTWHNAGTSYVLAGPSAEAALGQLAMKIATAI
HHHHHHCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDLRKLPLEAQLTALLDGEVSPEQRHELEQRLATDENARRLHEKLRHGADFGRRRLDDI
CCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKEPVPLALVRSIKSTQPPKTPIAQRATRPPVKLAPSGPQALAAALILFAVGCGIGYFVG
HHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHEEEE
ISPDADEIATTTSATAPANTSDWLGDVTAYQRLLIRQPRHLVEVPASQAEEISSWLTTAI
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHH
GVPFRVPDLSAEAWTFQGARVILGDSRPVGQLVYSNADGDVISICFRKDAQPPETDDFKE
CCCEECCCCCCCCEEECCCEEEEECCCCHHHHEEECCCCCEEEEEECCCCCCCCCHHHHH
TIKDEIGLVTWHNAGTSYVLAGPSAEAALGQLAMKIATAI
HHHHHHCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA