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The map label for this gene is uxuR [H]

Identifier: 209550240

GI number: 209550240

Start: 2709087

End: 2709797

Strand: Direct

Name: uxuR [H]

Synonym: Rleg2_2660

Alternate gene names: 209550240

Gene position: 2709087-2709797 (Clockwise)

Preceding gene: 209550232

Following gene: 209550243

Centisome position: 59.7

GC content: 62.31

Gene sequence:

>711_bases
ATGAAATCCGCTGCCAAGGCCATGCAGGCCGAAGACTCCGCCGAAACAAGCACACAACTGATCCGTGATTCCATTCGCGA
AGCAATCGTCGAGCGCAGGCTTTCGCCCGGCACCAAGCTCTCCGAAAAAGATGTCGGCAATCTCTTCAGCGTCAGCCGCA
CGCTTGCCCGCGCGGCACTGCAGGCACTCTCCTATGAAGGCCTCGTCAGCGTCGAGAAGAACCGCGGCGCCTTTGTCGCC
TATCCCTCGCCCGACGAGGCGCGACAGATCTTTGCGGCCCGCCGCCTGGTCGAGCCCGGCATATTGCGCGAGGCGGCCGC
ACGGATCACGCCTGCTGACATCAGCCAGCTGAAACAGCTTCTGCTGGAGGAAGGCCGCCTGATGAGCGAGCGCGGCCAGA
CGGCGCGGCGCGCCGAGATCAAGGCGTCGGGCGATTTTCACCTGAGGCTGGCGGAGATCTCCGGCAATGCGATCATGCAG
CGCTTCATGGAAGAACTGGTCGCCCGCTCGTCGCTGGTGATTGCCCTTTACGGCCAATCGACCGCCTCAAGCTGCGGCCA
TTCCGAACATGGCGAGATCATCACGGCGATCGAAAACAACGAGCTCGACCGCGCCTGCCAGCTGATGCTGCATCACATCA
CCCATATCGAGACCGATCTCGACCTGCGCGAACGCAAGAGCCTCGGCCTCAAGGAAGCCTTCGAGCTTTAG

Upstream 100 bases:

>100_bases
ATGATCGTATACAATTTGCTCGACGCTTCGAGCACAAATTCCGTTTAACTTTTGCCGTGAAGCCGGATATGGTTTGCCCA
TCATCAGGAAATCGATTTTC

Downstream 100 bases:

>100_bases
AAACGCCCTTCAGACGATCGGCATGCGAAGGCGCCGGGCGCGTGGCTTCGCCACGCCCGTCGTCCGTCAAGCGCAATCCG
ACACGCCTACCAAGGCGTCT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKSAAKAMQAEDSAETSTQLIRDSIREAIVERRLSPGTKLSEKDVGNLFSVSRTLARAALQALSYEGLVSVEKNRGAFVA
YPSPDEARQIFAARRLVEPGILREAAARITPADISQLKQLLLEEGRLMSERGQTARRAEIKASGDFHLRLAEISGNAIMQ
RFMEELVARSSLVIALYGQSTASSCGHSEHGEIITAIENNELDRACQLMLHHITHIETDLDLRERKSLGLKEAFEL

Sequences:

>Translated_236_residues
MKSAAKAMQAEDSAETSTQLIRDSIREAIVERRLSPGTKLSEKDVGNLFSVSRTLARAALQALSYEGLVSVEKNRGAFVA
YPSPDEARQIFAARRLVEPGILREAAARITPADISQLKQLLLEEGRLMSERGQTARRAEIKASGDFHLRLAEISGNAIMQ
RFMEELVARSSLVIALYGQSTASSCGHSEHGEIITAIENNELDRACQLMLHHITHIETDLDLRERKSLGLKEAFEL
>Mature_236_residues
MKSAAKAMQAEDSAETSTQLIRDSIREAIVERRLSPGTKLSEKDVGNLFSVSRTLARAALQALSYEGLVSVEKNRGAFVA
YPSPDEARQIFAARRLVEPGILREAAARITPADISQLKQLLLEEGRLMSERGQTARRAEIKASGDFHLRLAEISGNAIMQ
RFMEELVARSSLVIALYGQSTASSCGHSEHGEIITAIENNELDRACQLMLHHITHIETDLDLRERKSLGLKEAFEL

Specific function: Repressor for the uxuRBA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26070; Mature: 26070

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAAKAMQAEDSAETSTQLIRDSIREAIVERRLSPGTKLSEKDVGNLFSVSRTLARAAL
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
QALSYEGLVSVEKNRGAFVAYPSPDEARQIFAARRLVEPGILREAAARITPADISQLKQL
HHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
LLEEGRLMSERGQTARRAEIKASGDFHLRLAEISGNAIMQRFMEELVARSSLVIALYGQS
HHHHCHHHHHCCCHHHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCC
TASSCGHSEHGEIITAIENNELDRACQLMLHHITHIETDLDLRERKSLGLKEAFEL
HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHCC
>Mature Secondary Structure
MKSAAKAMQAEDSAETSTQLIRDSIREAIVERRLSPGTKLSEKDVGNLFSVSRTLARAAL
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
QALSYEGLVSVEKNRGAFVAYPSPDEARQIFAARRLVEPGILREAAARITPADISQLKQL
HHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
LLEEGRLMSERGQTARRAEIKASGDFHLRLAEISGNAIMQRFMEELVARSSLVIALYGQS
HHHHCHHHHHCCCHHHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCC
TASSCGHSEHGEIITAIENNELDRACQLMLHHITHIETDLDLRERKSLGLKEAFEL
HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]