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The map label for this gene is yvoA [H]

Identifier: 209550228

GI number: 209550228

Start: 2695543

End: 2696307

Strand: Direct

Name: yvoA [H]

Synonym: Rleg2_2648

Alternate gene names: 209550228

Gene position: 2695543-2696307 (Clockwise)

Preceding gene: 209550227

Following gene: 209550229

Centisome position: 59.4

GC content: 67.32

Gene sequence:

>765_bases
ATGACCGACGATCTCGCCACCCTTCTGTCCCTGGAGCGTCTGCAGGCAGCCGGCACCGGCCCGCTCTACGTCAAGCTGCG
CCGCACGCTCGAAGAGGCCGTGCGCACCGGCACGCTCGGCCATGGCGATGCGCTGCCGCCGGAACGCGATATCGCCGAAT
TCGCCGCCGTCAGCCGCGTTACCGTCCGCAAGGCGATCGACGAACTCGTCGCCGACGGCCTGCTGGTACGCCGTCACGGT
TCGGGCACCTTCGTCGCCAAACCGGTCTCCAGGGTCGAGCAGCGCCTGTCGCAGCTTACCTCCTTCACCGAGGACATGGC
GCGCCGCGGCATGTCCTCCCGCTCCGAATGGCTGCACAAGGGCATCCACACCCCCTCGCCCGACGAGATGATGATTCTCG
GCCTCGGCACCGACGTGAAGGTCTCCCGTCTCTCCCGCCTGCGCATCGCCGACGACCAGCCGCTGGCAATCGAGAATGCC
AGCGTCTCCGGCGAGTTTCTCCCCGATCCCTCGGCCGTGACCAATTCGCTCTATGCCGAACTCGAACGCCTCCAGGTCCG
CCCGGTGCGCGCCGTGCAGCGCATCTCGGCGACCAACATGAAGGAAGCCGACGCGCAGCTTCTCGGCGTCTCCGTCGGCG
CCGCCGGCCTGTCGATCGAACGTATCTCCTATCTCGGCTCCGGCCGCGCCGTGGAATTCACCCGCTCGCTCTATCGCGGC
GACGCCTATGATTTCGTCGCCGAGCTGACGATCGGGGTAACCTGA

Upstream 100 bases:

>100_bases
AACGCTACAGATCACGGCTTGCCAGGCCGAAGGGCGATGCCCTGCAGGGTGCGGTGGAACTTGCCGTCAAGCTCCTGCAC
GACGGACAGAGAGGTGCGGC

Downstream 100 bases:

>100_bases
TGCCTTGAGCTTATCCAAATTATACGTATAATCTGGATATCAAAGTTTGGAACCTTATCATGGCCCGGACCACGGCTCTG
GAATTTCAGCGAAAATTCGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTDDLATLLSLERLQAAGTGPLYVKLRRTLEEAVRTGTLGHGDALPPERDIAEFAAVSRVTVRKAIDELVADGLLVRRHG
SGTFVAKPVSRVEQRLSQLTSFTEDMARRGMSSRSEWLHKGIHTPSPDEMMILGLGTDVKVSRLSRLRIADDQPLAIENA
SVSGEFLPDPSAVTNSLYAELERLQVRPVRAVQRISATNMKEADAQLLGVSVGAAGLSIERISYLGSGRAVEFTRSLYRG
DAYDFVAELTIGVT

Sequences:

>Translated_254_residues
MTDDLATLLSLERLQAAGTGPLYVKLRRTLEEAVRTGTLGHGDALPPERDIAEFAAVSRVTVRKAIDELVADGLLVRRHG
SGTFVAKPVSRVEQRLSQLTSFTEDMARRGMSSRSEWLHKGIHTPSPDEMMILGLGTDVKVSRLSRLRIADDQPLAIENA
SVSGEFLPDPSAVTNSLYAELERLQVRPVRAVQRISATNMKEADAQLLGVSVGAAGLSIERISYLGSGRAVEFTRSLYRG
DAYDFVAELTIGVT
>Mature_253_residues
TDDLATLLSLERLQAAGTGPLYVKLRRTLEEAVRTGTLGHGDALPPERDIAEFAAVSRVTVRKAIDELVADGLLVRRHGS
GTFVAKPVSRVEQRLSQLTSFTEDMARRGMSSRSEWLHKGIHTPSPDEMMILGLGTDVKVSRLSRLRIADDQPLAIENAS
VSGEFLPDPSAVTNSLYAELERLQVRPVRAVQRISATNMKEADAQLLGVSVGAAGLSIERISYLGSGRAVEFTRSLYRGD
AYDFVAELTIGVT

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=241, Percent_Identity=32.3651452282158, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1786950, Length=234, Percent_Identity=32.0512820512821, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87082252, Length=226, Percent_Identity=26.5486725663717, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790118, Length=119, Percent_Identity=38.655462184874, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27618; Mature: 27487

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDLATLLSLERLQAAGTGPLYVKLRRTLEEAVRTGTLGHGDALPPERDIAEFAAVSRV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
TVRKAIDELVADGLLVRRHGSGTFVAKPVSRVEQRLSQLTSFTEDMARRGMSSRSEWLHK
HHHHHHHHHHHCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
GIHTPSPDEMMILGLGTDVKVSRLSRLRIADDQPLAIENASVSGEFLPDPSAVTNSLYAE
CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
LERLQVRPVRAVQRISATNMKEADAQLLGVSVGAAGLSIERISYLGSGRAVEFTRSLYRG
HHHHHCCHHHHHHHHHHCCCHHHHHHHHEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCC
DAYDFVAELTIGVT
CHHHHHHHHHHCCC
>Mature Secondary Structure 
TDDLATLLSLERLQAAGTGPLYVKLRRTLEEAVRTGTLGHGDALPPERDIAEFAAVSRV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
TVRKAIDELVADGLLVRRHGSGTFVAKPVSRVEQRLSQLTSFTEDMARRGMSSRSEWLHK
HHHHHHHHHHHCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
GIHTPSPDEMMILGLGTDVKVSRLSRLRIADDQPLAIENASVSGEFLPDPSAVTNSLYAE
CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
LERLQVRPVRAVQRISATNMKEADAQLLGVSVGAAGLSIERISYLGSGRAVEFTRSLYRG
HHHHHCCHHHHHHHHHHCCCHHHHHHHHEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCC
DAYDFVAELTIGVT
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]