Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is cheW [H]
Identifier: 209550155
GI number: 209550155
Start: 2613704
End: 2614174
Strand: Direct
Name: cheW [H]
Synonym: Rleg2_2575
Alternate gene names: 209550155
Gene position: 2613704-2614174 (Clockwise)
Preceding gene: 209550151
Following gene: 209550158
Centisome position: 57.6
GC content: 62.0
Gene sequence:
>471_bases ATGAACAACAACAACGCCATCAAGCAGTCGGGCGCTTATCTCGAAATCGTCTCGTTCCACCTGGGCGACCAGGAATTCTG CATCGATATCATGGCCATCCGCGAAATCCGCGGCTGGGCGCCGGTGACGCCGATGCCGCACACCCCACCCTACGTGCTCG GCCTCATCAACCTGCGCGGCGCGGTTATCCCCGTCATCGACATGGCCTGCCGCCTCGGCATGAAGATGACCGAGCCCTCG GAGCGCTCGGCGATCATCGTCACCGACATCGCCGGCAAGCTCGTCGGCCTGCTGGTCGAGCAGGTATCCGATATGATGAC CATCAAGAGCGAAGACCTGCAGCCGCCGCCGGAAATCATCCCGGAAGCCCAGCGCGCCTTCTGCCGCGGCATCGTCGCGC TCGAAAAGACCATGGTCTGCTTCCTGAATCTCGATACGGTTATCGCCGACGAACTGACGCAGGCGGCTTGA
Upstream 100 bases:
>100_bases AAAATACATATCGTTAGGAAAGACTTAAGCCGTCACATCTATATTTAATGGCGGTTCTGCATCGCTACTCCGCCGGGGAT AACTGGGAAGAATTCTGACC
Downstream 100 bases:
>100_bases TATTTATCGCAAAACGGAATGCGAAGGCCCGGCTCGTCCGGGCCCTTTTTCGTTTGAAAAAGACCGACTCGTCGCCGATC TCTCCATCCTCTCCTCCCTC
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MNNNNAIKQSGAYLEIVSFHLGDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMACRLGMKMTEPS ERSAIIVTDIAGKLVGLLVEQVSDMMTIKSEDLQPPPEIIPEAQRAFCRGIVALEKTMVCFLNLDTVIADELTQAA
Sequences:
>Translated_156_residues MNNNNAIKQSGAYLEIVSFHLGDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMACRLGMKMTEPS ERSAIIVTDIAGKLVGLLVEQVSDMMTIKSEDLQPPPEIIPEAQRAFCRGIVALEKTMVCFLNLDTVIADELTQAA >Mature_156_residues MNNNNAIKQSGAYLEIVSFHLGDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMACRLGMKMTEPS ERSAIIVTDIAGKLVGLLVEQVSDMMTIKSEDLQPPPEIIPEAQRAFCRGIVALEKTMVCFLNLDTVIADELTQAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=137, Percent_Identity=30.6569343065693, Blast_Score=102, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17121; Mature: 17121
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNNAIKQSGAYLEIVSFHLGDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRG CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEHHHHCC AVIPVIDMACRLGMKMTEPSERSAIIVTDIAGKLVGLLVEQVSDMMTIKSEDLQPPPEII HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC PEAQRAFCRGIVALEKTMVCFLNLDTVIADELTQAA CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MNNNNAIKQSGAYLEIVSFHLGDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRG CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEHHHHCC AVIPVIDMACRLGMKMTEPSERSAIIVTDIAGKLVGLLVEQVSDMMTIKSEDLQPPPEII HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC PEAQRAFCRGIVALEKTMVCFLNLDTVIADELTQAA CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7623670; 11481430 [H]