Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550146
Identifier: 209550146
GI number: 209550146
Start: 2604529
End: 2605032
Strand: Direct
Name: 209550146
Synonym: Rleg2_2565
Alternate gene names: NA
Gene position: 2604529-2605032 (Clockwise)
Preceding gene: 209550144
Following gene: 209550147
Centisome position: 57.39
GC content: 61.9
Gene sequence:
>504_bases GTGACCAGTGTTTCATCTCTCGGCAGCACACTATCCCAGTACCAGTCTCCGCTTTCCAGCCTCGACAAGAATGGCGACGG CGTCGTTTCGGCGGACGAACTCGCCGCCGCATCGCAGTCTTCATCATCCGGCGCGGCTGCGACCACCGCCGATAGCGACG ACAGCAGTGCCGATATCGTCAAGAAGATCACCGCCGACATCCTGTCCCTGATGCTGTCCCTGCAGAAGACCGACGGCAGC GACGATCAGAGCGACGGCAGCGATCAGAGCGACGACACCTCCAAGGGCGTCTTTGCCGCGATGGATACCAATGGCGACGG CAAATTGACCGCGGCCGAATTCCTCGCCGCCGATCCGAGCAAGATCAGCACCTCAGGCGACAGCGATCCGCTGCTCACCA AAGTGCTGAGTGACATGCAGACGGCCCTCCAAGCCCATCGCAATACCTACGGCGCATCCCCCGCGGCAAGTGATTCCGCA GCCGAAGGCGTGACACCGGCATAG
Upstream 100 bases:
>100_bases TCAAAACGTCGCTTTGACGCTTTGCGCAAATCAGCTTAGCCCGGAACCTGCCCGTCCATGAAAGGCGGGCTTCACGACGA ACTTTTCGAAGGAGGTTCAA
Downstream 100 bases:
>100_bases TTCGGCATGAGGCTCCGCCGGGGGAGCCTCGATCCGCAGACGCAAAAGCGTCTTCCGCCTTCCCTTCCATTTCGACACGA GAGTCGTCGCCAACTCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTSVSSLGSTLSQYQSPLSSLDKNGDGVVSADELAAASQSSSSGAAATTADSDDSSADIVKKITADILSLMLSLQKTDGS DDQSDGSDQSDDTSKGVFAAMDTNGDGKLTAAEFLAADPSKISTSGDSDPLLTKVLSDMQTALQAHRNTYGASPAASDSA AEGVTPA
Sequences:
>Translated_167_residues MTSVSSLGSTLSQYQSPLSSLDKNGDGVVSADELAAASQSSSSGAAATTADSDDSSADIVKKITADILSLMLSLQKTDGS DDQSDGSDQSDDTSKGVFAAMDTNGDGKLTAAEFLAADPSKISTSGDSDPLLTKVLSDMQTALQAHRNTYGASPAASDSA AEGVTPA >Mature_166_residues TSVSSLGSTLSQYQSPLSSLDKNGDGVVSADELAAASQSSSSGAAATTADSDDSSADIVKKITADILSLMLSLQKTDGSD DQSDGSDQSDDTSKGVFAAMDTNGDGKLTAAEFLAADPSKISTSGDSDPLLTKVLSDMQTALQAHRNTYGASPAASDSAA EGVTPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16691; Mature: 16560
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVSSLGSTLSQYQSPLSSLDKNGDGVVSADELAAASQSSSSGAAATTADSDDSSADIV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCHHHHH KKITADILSLMLSLQKTDGSDDQSDGSDQSDDTSKGVFAAMDTNGDGKLTAAEFLAADPS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCC KISTSGDSDPLLTKVLSDMQTALQAHRNTYGASPAASDSAAEGVTPA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSVSSLGSTLSQYQSPLSSLDKNGDGVVSADELAAASQSSSSGAAATTADSDDSSADIV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCHHHHH KKITADILSLMLSLQKTDGSDDQSDGSDQSDDTSKGVFAAMDTNGDGKLTAAEFLAADPS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCC KISTSGDSDPLLTKVLSDMQTALQAHRNTYGASPAASDSAAEGVTPA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA