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The map label for this gene is abrB [H]

Identifier: 209550133

GI number: 209550133

Start: 2584989

End: 2586092

Strand: Direct

Name: abrB [H]

Synonym: Rleg2_2551

Alternate gene names: 209550133

Gene position: 2584989-2586092 (Clockwise)

Preceding gene: 209550132

Following gene: 209550135

Centisome position: 56.96

GC content: 66.76

Gene sequence:

>1104_bases
ATGGGGATCATGCCTTTCAGCGACGCACGCCGCCTGCTGCGCGATGCCGGCCTGCCGAAATGGGCGCTGCTGCTGGCGCT
CTCCACCGCTCTCGTCGTCTTCCTCGAACTCTTCGCCCTGCCCGCCTCGCTGCTGATCGGACCGATGGCCGCGGCCATCC
TGCTGGCGCTGACGGTCGGCAAGGGAAAGCTTCGCATTCCGGTTTGGCCGCTGCAATTCGGCCAGGTCCTCGTTGGCCTG
ATGATGGCACGCACCATCACTCCCGACATTCTCGGCACCATGGCGAAGGACGCGCCGCTTTTCCTGCTGTTCATCTTCTC
TGTCATCGCCATTGCCACCGGCCTCGGCTGGCTCTTGACGCGCTGGCAGGTGCTGCCGGGAACGACCGCCGTCTGGGGTT
CTTCGCCGGGCGGGGCGTCGGCCATGGTCATCATGTCTGAGGCCTATGGCGCCGATGCCCGCCTCGTCGCCTTCATGCAA
TATCTGCGCGTCGTCTTCGTCGCCGTCGGCGCCTCGGTGATCTCACGCCTGTGGGTGGCCGCCGACGGGGCCGAACCGCC
ACCGCTTATCCTCTTTCCCGAGGTCGACTGGCCGGCCTTTGCGGCGACGATCGCCTTTGCCGGCTTGTGCGCCTATGGCG
TCCGGCGTCTGCGCATCCAGGGTGGCACGATCATCGTGCCGCTCTTCCTCGGCGCCTTCCTGCAAGGCGTCGGCCTCCTG
AAGATCGAGCTGCCGATGTGGCTGCTCGCCATCGCCTATGCGCTCGTCGGCTGGAGCATCGGCCTGCGTTTCACCCGCTC
GATCCTTGAACACGTGGCGCGCGCCCTGCCGCGGGTGTCGGCCTGCATCGTGCTGTTGATGGCGCTCTGCGGCTGCATGG
CGGCGGCCCTCCATATCTTCGCCGGCATCGATCCGCTGACGGCCTATCTCGCCACCAGCCCCGGCGGCGCCGATTCCGTC
GCCATCATCGCCGCCTCCAGCGATGTCGACGTGCCTTTCGTCATGGCGATGCAGACCGGCCGCTTCCTCATCATTCTGCT
GATCGGCCCGACGCTCGCCCGCTTCATCGCCCGCCGCTCCGGCCTTGCGGAAAATCCCGTATAA

Upstream 100 bases:

>100_bases
CCGAACCCGCGCCAGCCGGTCCTTGCAGCCGGCCTCTCTTCGTCATGCCGGAGCTTCCTCCCATCTTCAGCCTCAGGGCT
TGGCACCGGCCGGGAAAGAT

Downstream 100 bases:

>100_bases
AGCGCGGGGCGGAATTGTGGGCGAGCGTTGCCCACTGGCCAGGCGTCATGCCGTAGGCCTTCTTGAAATGCCGGTTGAGA
TGGCTCTGGTCGGCAAAGCC

Product: membrane protein AbrB

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MGIMPFSDARRLLRDAGLPKWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVGKGKLRIPVWPLQFGQVLVGL
MMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLTRWQVLPGTTAVWGSSPGGASAMVIMSEAYGADARLVAFMQ
YLRVVFVAVGASVISRLWVAADGAEPPPLILFPEVDWPAFAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLL
KIELPMWLLAIAYALVGWSIGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADSV
AIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRSGLAENPV

Sequences:

>Translated_367_residues
MGIMPFSDARRLLRDAGLPKWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVGKGKLRIPVWPLQFGQVLVGL
MMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLTRWQVLPGTTAVWGSSPGGASAMVIMSEAYGADARLVAFMQ
YLRVVFVAVGASVISRLWVAADGAEPPPLILFPEVDWPAFAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLL
KIELPMWLLAIAYALVGWSIGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADSV
AIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRSGLAENPV
>Mature_366_residues
GIMPFSDARRLLRDAGLPKWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVGKGKLRIPVWPLQFGQVLVGLM
MARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLTRWQVLPGTTAVWGSSPGGASAMVIMSEAYGADARLVAFMQY
LRVVFVAVGASVISRLWVAADGAEPPPLILFPEVDWPAFAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLLK
IELPMWLLAIAYALVGWSIGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADSVA
IIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRSGLAENPV

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=341, Percent_Identity=44.8680351906158, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 38876; Mature: 38745

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIMPFSDARRLLRDAGLPKWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVG
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGKLRIPVWPLQFGQVLVGLMMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLT
CCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RWQVLPGTTAVWGSSPGGASAMVIMSEAYGADARLVAFMQYLRVVFVAVGASVISRLWVA
HHEECCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGAEPPPLILFPEVDWPAFAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLL
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHCCCCEE
KIELPMWLLAIAYALVGWSIGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIF
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDPLTAYLATSPGGADSVAIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRS
HCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHC
GLAENPV
CCCCCCC
>Mature Secondary Structure 
GIMPFSDARRLLRDAGLPKWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVG
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGKLRIPVWPLQFGQVLVGLMMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLT
CCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RWQVLPGTTAVWGSSPGGASAMVIMSEAYGADARLVAFMQYLRVVFVAVGASVISRLWVA
HHEECCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGAEPPPLILFPEVDWPAFAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLL
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHCCCCEE
KIELPMWLLAIAYALVGWSIGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIF
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDPLTAYLATSPGGADSVAIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRS
HCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHC
GLAENPV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]