Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550110
Identifier: 209550110
GI number: 209550110
Start: 2558116
End: 2559354
Strand: Direct
Name: 209550110
Synonym: Rleg2_2527
Alternate gene names: NA
Gene position: 2558116-2559354 (Clockwise)
Preceding gene: 209550106
Following gene: 209550111
Centisome position: 56.37
GC content: 66.26
Gene sequence:
>1239_bases ATGAACATTCTGATTCTCGGCGCAACCGGCTTCATAGGCTCCGTCGTCGCGGCCCGGCTCGTCGCCGATGGGCATGCTGT GACCGGGCTGGGCCGCAATCCCATGCGTGCCCGTCTGAAACAGCCGGCGATCGAATGGCGGCGCGCCGATCTCTCGCACA TGACAAGGCCCGGGGACTGGGAAGATCTCCTCAAAGACCGGCAGGCTGTCGTCAATTGCGCCGGCGCGCTACAGGATGGG CTCTCCGACGATCTCTCGGCCACGCAGGCTGAAGCGATGCTGGCGCTCTATGCCGCCGCCAAACGCACATCTCAGCCATT GGTCGTGCAGATATCGGCAAGGACTGCGGGAGCGGCAGGCGACCTGCCCTTCCTCGCCACCAAGCGGCGGGCCGACGAGG CGCTAGTAGGAAGCGGCCTGCCTCATCTCATCCTCCGCCCTGCCCTCGGGCTCGGCCGCAATGCCCATGGCGGCTCGTCG CTGCTCAGGGCTCTTGCCGCCTTTCCGCTGGCGCTGCCGCTCGTCCATGCCGACAGTCCGGTCGAAACGCTTTCTGTGGA CGATGTGGCGGAAGCCGTATCCCGGGCTGTCGCAGGCGGCCTCCGCGGGGATATTGATCTTGCCGCCGACGAGGTTCTCA CACTCGCCGATCTCATCGGCCTTCACCGGCAATGGCTGGGCCTAGCACCCGCCCGCGTCTTTTCCCTTGCCTCGTGGCTC GCCAGGCCCGTGACGTGGCTTGCCGATATGGCGGGGCTGCTCGGCTGGCGTTCGCCGCTGCGCTCGACGGCGATGACCGT CATGTCGGAGGGCATACGAAGCGAAAAACGGGAAAGCGGCCTAACCGCGACATCCGCGCCGGCAACGCTCTCGGCCAATC CCTCCGGCGTGCAGGATCTCTGGTTTGCCCGGCTCTATCTCCTGAAACCGCTCGTCATATCAGGGCTCTCCGTCTTCTGG CTGCTCTCTGGCCTCATCCCGCTGCTGGCGCTCACGAAGACATCCGCCCACTTCCTGCCGTTCATGCCCGAAGCGGCGGC AACGGCGCTGACGCTTGCGACCTGCCTGATCGACGTGGCGCTCGGCGCCACCGTACTTGTCCGTCCGCTCGCCAAACGCG CTCTTCTCGGCATGCTGGCCGTCTCTTTCGCCTATCTGACCGCGCCAGCCTGCTCGAACCCGCGCTCTGGCTCGACCCGC TCGGCCCCCTCGTCAAGGTGCTGCCGTCGATCTTGCTGA
Upstream 100 bases:
>100_bases CCCTAAGGCATGCTCATAAAGTCATCTCCTCTTTCTATCACACACCACACTCCCGCCAAGCCCTTCTATCCCCTTCAAAC TTTTCCGCTAATCTCCCGCC
Downstream 100 bases:
>100_bases CGCTGACGGCCCTTGCCACCCTGGATGAACGCTGATGCTCGAGGAGTGGCTGCTGCTTGCCCATGTCATCGGCGCGACCG TGCTCTTCGGCACCGGCGCC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Oxidoreductase Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; Transmembrane Protein; NADH-Ubiquinone Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase Protein
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNILILGATGFIGSVVAARLVADGHAVTGLGRNPMRARLKQPAIEWRRADLSHMTRPGDWEDLLKDRQAVVNCAGALQDG LSDDLSATQAEAMLALYAAAKRTSQPLVVQISARTAGAAGDLPFLATKRRADEALVGSGLPHLILRPALGLGRNAHGGSS LLRALAAFPLALPLVHADSPVETLSVDDVAEAVSRAVAGGLRGDIDLAADEVLTLADLIGLHRQWLGLAPARVFSLASWL ARPVTWLADMAGLLGWRSPLRSTAMTVMSEGIRSEKRESGLTATSAPATLSANPSGVQDLWFARLYLLKPLVISGLSVFW LLSGLIPLLALTKTSAHFLPFMPEAAATALTLATCLIDVALGATVLVRPLAKRALLGMLAVSFAYLTAPACSNPRSGSTR SAPSSRCCRRSC
Sequences:
>Translated_412_residues MNILILGATGFIGSVVAARLVADGHAVTGLGRNPMRARLKQPAIEWRRADLSHMTRPGDWEDLLKDRQAVVNCAGALQDG LSDDLSATQAEAMLALYAAAKRTSQPLVVQISARTAGAAGDLPFLATKRRADEALVGSGLPHLILRPALGLGRNAHGGSS LLRALAAFPLALPLVHADSPVETLSVDDVAEAVSRAVAGGLRGDIDLAADEVLTLADLIGLHRQWLGLAPARVFSLASWL ARPVTWLADMAGLLGWRSPLRSTAMTVMSEGIRSEKRESGLTATSAPATLSANPSGVQDLWFARLYLLKPLVISGLSVFW LLSGLIPLLALTKTSAHFLPFMPEAAATALTLATCLIDVALGATVLVRPLAKRALLGMLAVSFAYLTAPACSNPRSGSTR SAPSSRCCRRSC >Mature_412_residues MNILILGATGFIGSVVAARLVADGHAVTGLGRNPMRARLKQPAIEWRRADLSHMTRPGDWEDLLKDRQAVVNCAGALQDG LSDDLSATQAEAMLALYAAAKRTSQPLVVQISARTAGAAGDLPFLATKRRADEALVGSGLPHLILRPALGLGRNAHGGSS LLRALAAFPLALPLVHADSPVETLSVDDVAEAVSRAVAGGLRGDIDLAADEVLTLADLIGLHRQWLGLAPARVFSLASWL ARPVTWLADMAGLLGWRSPLRSTAMTVMSEGIRSEKRESGLTATSAPATLSANPSGVQDLWFARLYLLKPLVISGLSVFW LLSGLIPLLALTKTSAHFLPFMPEAAATALTLATCLIDVALGATVLVRPLAKRALLGMLAVSFAYLTAPACSNPRSGSTR SAPSSRCCRRSC
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43275; Mature: 43275
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILILGATGFIGSVVAARLVADGHAVTGLGRNPMRARLKQPAIEWRRADLSHMTRPGDW CCEEEEECCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH EDLLKDRQAVVNCAGALQDGLSDDLSATQAEAMLALYAAAKRTSQPLVVQISARTAGAAG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC DLPFLATKRRADEALVGSGLPHLILRPALGLGRNAHGGSSLLRALAAFPLALPLVHADSP CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC VETLSVDDVAEAVSRAVAGGLRGDIDLAADEVLTLADLIGLHRQWLGLAPARVFSLASWL CHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ARPVTWLADMAGLLGWRSPLRSTAMTVMSEGIRSEKRESGLTATSAPATLSANPSGVQDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHH WFARLYLLKPLVISGLSVFWLLSGLIPLLALTKTSAHFLPFMPEAAATALTLATCLIDVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHH LGATVLVRPLAKRALLGMLAVSFAYLTAPACSNPRSGSTRSAPSSRCCRRSC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MNILILGATGFIGSVVAARLVADGHAVTGLGRNPMRARLKQPAIEWRRADLSHMTRPGDW CCEEEEECCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH EDLLKDRQAVVNCAGALQDGLSDDLSATQAEAMLALYAAAKRTSQPLVVQISARTAGAAG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC DLPFLATKRRADEALVGSGLPHLILRPALGLGRNAHGGSSLLRALAAFPLALPLVHADSP CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC VETLSVDDVAEAVSRAVAGGLRGDIDLAADEVLTLADLIGLHRQWLGLAPARVFSLASWL CHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ARPVTWLADMAGLLGWRSPLRSTAMTVMSEGIRSEKRESGLTATSAPATLSANPSGVQDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHH WFARLYLLKPLVISGLSVFWLLSGLIPLLALTKTSAHFLPFMPEAAATALTLATCLIDVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHH LGATVLVRPLAKRALLGMLAVSFAYLTAPACSNPRSGSTRSAPSSRCCRRSC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA