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The map label for this gene is ynaI [C]

Identifier: 209550102

GI number: 209550102

Start: 2551983

End: 2553461

Strand: Direct

Name: ynaI [C]

Synonym: Rleg2_2519

Alternate gene names: 209550102

Gene position: 2551983-2553461 (Clockwise)

Preceding gene: 209550101

Following gene: 209550104

Centisome position: 56.24

GC content: 63.15

Gene sequence:

>1479_bases
ATGATCTACGACGCGCTCTTCGGCAAGCCACTGATATCCCTGATAACAGTCGGCTTTGCCGGTATCGTCGTCTGGCACCT
GCTTTCCCGCCAGCGGCCGACGACGCGGCTGGTGGTGCAGATCGTCTTCTTTGGCTTAATGACGCTGATCCTCGTCGGCA
GCGGCATCGAACCTCATCGGTTTCAAGGATATGGGTCCGAGGATCCGCAGGCCTTGCTTGTCGTTGTCGCGAAAACGCTC
TGGTGGATTCATCTCGCATGGGCTGTCATCGGTTTTATCAGGCTGTATCTGGTTCTGGAAGGCAGTCCCCGAGAGGCCCG
CCTGCTCCAGGATCTCGTTATCGGCGTCGTCTATATCGGCATGGCCCTGTCGGTCCTGGCCTTCGTCTTCGGCGTGCCGA
TCGGCACCCTCGTTGCCACCTCGGGCGTGGTCGCCATCATTCTCGGCCTTGCGCTCCAGAACACGCTCGCCGACGTCTTC
TCCGGCATCGCGCTGACACTCGGCCGGCCTTATGTCATCGGCGACTGGATTCTTTTGAGCGATGGCACGGAAGGGCGCGT
CGTCGAGAGCAACTGGCGCGCAACGCATATCCTGACCAGCGCCAACAATATCGTCGTTCTGCCGAACAGTTTTCTCGCCA
AGCTCGGTCTGACGAATGTCAGCCGGCCGGACGAGAGCCATCTGCTGATCCTCACCATCCGCATTGCCCCGACACGGATG
CCGGCATCGGTCCGCCAGGTCATGTTATCGGCGCTGACGAGCTGCAATTCGATCGTGCGTGACCCGCCGCCGGTCGTCGC
ATTGAAGGGGCTGGACGCCACCGCGCTCGAAGTCGAGCTGCAGTTCCGGGTGGCGAGCCCGAGCCGGCGTGTCCAGGCGC
GCAACGAGGTGCTCGATCTCGTCTATCGCCACTGCAAATCCGCCGGCCTGCTTCTCGCCGTTCCGGCGGCGGCCTCGGTG
CTGACGGGCGATCTGCCGACAGAAGAGAGCGCACGACCGCCGCGCGTCACGCCGCTCGAACTGATCGAGGCCATTCCGAT
CTTTGCGACGCTGACGACAGATGAAAAGCAGAAGCTTGCCGAGACCACCGCCGTGCGTGAATTCCGCAAGGGCGACGTGA
TCGTCCGGGAGAGCGACATGCTGCCGTCGCTGATGATGGTGCGGGCCGGCATTATTGGGGCGCGGCACGGCGATGGGGAA
CGCGGGCGGCTCGCGCCAGGTGATTTTTTCGGAGAGACCGGACTGCTCGCCGGCATGCAGGAAGTCTGCACGCTCGAGGC
TCTGACCCCCGTGACGGTCTATGAAATCGATCAGCAGGCCTTCGCCCCGTTGCTGAACCAGCGTCCGGCGCTGGCGGAGG
AAATCGCCGAAGAACTCGCCAGCCGCGCCGAGCGCTTTCGCGATGCCGCCCTGCCCCCGGAACCCGCCCACAGCGCGCAT
GCCATTCTGAAAACCATCAGGACAATCTTCAGGGGCTAG

Upstream 100 bases:

>100_bases
AAGTAAGGGCCGCCAAACCCGTCCGCCCGGGGCCGATGCTTGCGCGGACGGCCGACATGCTCAATCATGTGCCGCCCACC
CCTCCCGGAGACAGAAAGAG

Downstream 100 bases:

>100_bases
CACGATGCGTAGATTCAATACGTCCAATAATACGCACGGCCCGGCAATCAGCCGGCGCGCTTGAGCACCCATTCGAAGGT
ACTCCGCCAAAGCTCGGCCG

Product: cyclic nucleotide-regulated small mechanosensitive ion channel

Products: NA

Alternate protein names: Integral Membrane Protein; Transporter MscS Family; Mechanosensitive Channel Protein; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Protein; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Family Protein; Transmembrane Transporter; Small-Conductance Mechanosensitive Channel; Transmembrane Protein; Potassium Efflux System KEFA; Mechanosensitive Ion Channel MscS; Ion Mechanosensitive Channel; MscS-Like Mechanosensitive Channel; Conserved Membrane Protein; Mechanosensitive Ion Channel Family Protein MscS; Transcriptional Regulator Crp/Fnr Family; Mechanosensitive Ion Channel Protein MscS

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MIYDALFGKPLISLITVGFAGIVVWHLLSRQRPTTRLVVQIVFFGLMTLILVGSGIEPHRFQGYGSEDPQALLVVVAKTL
WWIHLAWAVIGFIRLYLVLEGSPREARLLQDLVIGVVYIGMALSVLAFVFGVPIGTLVATSGVVAIILGLALQNTLADVF
SGIALTLGRPYVIGDWILLSDGTEGRVVESNWRATHILTSANNIVVLPNSFLAKLGLTNVSRPDESHLLILTIRIAPTRM
PASVRQVMLSALTSCNSIVRDPPPVVALKGLDATALEVELQFRVASPSRRVQARNEVLDLVYRHCKSAGLLLAVPAAASV
LTGDLPTEESARPPRVTPLELIEAIPIFATLTTDEKQKLAETTAVREFRKGDVIVRESDMLPSLMMVRAGIIGARHGDGE
RGRLAPGDFFGETGLLAGMQEVCTLEALTPVTVYEIDQQAFAPLLNQRPALAEEIAEELASRAERFRDAALPPEPAHSAH
AILKTIRTIFRG

Sequences:

>Translated_492_residues
MIYDALFGKPLISLITVGFAGIVVWHLLSRQRPTTRLVVQIVFFGLMTLILVGSGIEPHRFQGYGSEDPQALLVVVAKTL
WWIHLAWAVIGFIRLYLVLEGSPREARLLQDLVIGVVYIGMALSVLAFVFGVPIGTLVATSGVVAIILGLALQNTLADVF
SGIALTLGRPYVIGDWILLSDGTEGRVVESNWRATHILTSANNIVVLPNSFLAKLGLTNVSRPDESHLLILTIRIAPTRM
PASVRQVMLSALTSCNSIVRDPPPVVALKGLDATALEVELQFRVASPSRRVQARNEVLDLVYRHCKSAGLLLAVPAAASV
LTGDLPTEESARPPRVTPLELIEAIPIFATLTTDEKQKLAETTAVREFRKGDVIVRESDMLPSLMMVRAGIIGARHGDGE
RGRLAPGDFFGETGLLAGMQEVCTLEALTPVTVYEIDQQAFAPLLNQRPALAEEIAEELASRAERFRDAALPPEPAHSAH
AILKTIRTIFRG
>Mature_492_residues
MIYDALFGKPLISLITVGFAGIVVWHLLSRQRPTTRLVVQIVFFGLMTLILVGSGIEPHRFQGYGSEDPQALLVVVAKTL
WWIHLAWAVIGFIRLYLVLEGSPREARLLQDLVIGVVYIGMALSVLAFVFGVPIGTLVATSGVVAIILGLALQNTLADVF
SGIALTLGRPYVIGDWILLSDGTEGRVVESNWRATHILTSANNIVVLPNSFLAKLGLTNVSRPDESHLLILTIRIAPTRM
PASVRQVMLSALTSCNSIVRDPPPVVALKGLDATALEVELQFRVASPSRRVQARNEVLDLVYRHCKSAGLLLAVPAAASV
LTGDLPTEESARPPRVTPLELIEAIPIFATLTTDEKQKLAETTAVREFRKGDVIVRESDMLPSLMMVRAGIIGARHGDGE
RGRLAPGDFFGETGLLAGMQEVCTLEALTPVTVYEIDQQAFAPLLNQRPALAEEIAEELASRAERFRDAALPPEPAHSAH
AILKTIRTIFRG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787591, Length=94, Percent_Identity=37.2340425531915, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI2367355, Length=203, Percent_Identity=27.5862068965517, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53374; Mature: 53374

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDALFGKPLISLITVGFAGIVVWHLLSRQRPTTRLVVQIVFFGLMTLILVGSGIEPHR
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
FQGYGSEDPQALLVVVAKTLWWIHLAWAVIGFIRLYLVLEGSPREARLLQDLVIGVVYIG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MALSVLAFVFGVPIGTLVATSGVVAIILGLALQNTLADVFSGIALTLGRPYVIGDWILLS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
DGTEGRVVESNWRATHILTSANNIVVLPNSFLAKLGLTNVSRPDESHLLILTIRIAPTRM
CCCCCCEEECCCCEEEEEECCCCEEEECCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC
PASVRQVMLSALTSCNSIVRDPPPVVALKGLDATALEVELQFRVASPSRRVQARNEVLDL
CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
VYRHCKSAGLLLAVPAAASVLTGDLPTEESARPPRVTPLELIEAIPIFATLTTDEKQKLA
HHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCHHHHHH
ETTAVREFRKGDVIVRESDMLPSLMMVRAGIIGARHGDGERGRLAPGDFFGETGLLAGMQ
HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHH
EVCTLEALTPVTVYEIDQQAFAPLLNQRPALAEEIAEELASRAERFRDAALPPEPAHSAH
HHHHHHHCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AILKTIRTIFRG
HHHHHHHHHHCC
>Mature Secondary Structure
MIYDALFGKPLISLITVGFAGIVVWHLLSRQRPTTRLVVQIVFFGLMTLILVGSGIEPHR
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
FQGYGSEDPQALLVVVAKTLWWIHLAWAVIGFIRLYLVLEGSPREARLLQDLVIGVVYIG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MALSVLAFVFGVPIGTLVATSGVVAIILGLALQNTLADVFSGIALTLGRPYVIGDWILLS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
DGTEGRVVESNWRATHILTSANNIVVLPNSFLAKLGLTNVSRPDESHLLILTIRIAPTRM
CCCCCCEEECCCCEEEEEECCCCEEEECCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC
PASVRQVMLSALTSCNSIVRDPPPVVALKGLDATALEVELQFRVASPSRRVQARNEVLDL
CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
VYRHCKSAGLLLAVPAAASVLTGDLPTEESARPPRVTPLELIEAIPIFATLTTDEKQKLA
HHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCHHHHHH
ETTAVREFRKGDVIVRESDMLPSLMMVRAGIIGARHGDGERGRLAPGDFFGETGLLAGMQ
HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHH
EVCTLEALTPVTVYEIDQQAFAPLLNQRPALAEEIAEELASRAERFRDAALPPEPAHSAH
HHHHHHHCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AILKTIRTIFRG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA