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The map label for this gene is nagC [C]

Identifier: 209549936

GI number: 209549936

Start: 2413028

End: 2414179

Strand: Direct

Name: nagC [C]

Synonym: Rleg2_2352

Alternate gene names: 209549936

Gene position: 2413028-2414179 (Clockwise)

Preceding gene: 209549927

Following gene: 209549937

Centisome position: 53.17

GC content: 61.81

Gene sequence:

>1152_bases
ATGGCCTATTTCCCGGAACCCCTGATCGCGCCGCGCTTCCTGCGCGAAGGCGGTGGCGTCGTTTCTTCGAACGAGCGCGA
CATGCTGAGACTGATCTGGCGTCATCCGGGCCTCTCCCGCTCCGAAGTCACCGGCCATACCGACCTTACCCAGCAATCCG
TCTACCGGATCATCGACCAGTTGGAGGAGCGCGGCATCGTCTCCTTCGGTTCGCCGAAGCCCGGCACCGGCCGCGGCCAG
CCGAGCCCGACTCTGCGCCTCGAAGGCCGCTATGCCTATAGCTGCGGCATCTCGGTCAATACCGACGTGATCGGCATTTG
CCTGATGGATATATCAGGCAAGGTGCTGGCCGAAAGTAGCATCATCCTGCGGGAGCGCTCGATGGCCCAGTCGCTCGATC
TCGTGCGTGAGCACCTGGCCGAACATCAGCGAGCAAACGACCTCTCCGAGGACGCCTTTTTCGGCATCGGCTTTGCCATT
GCCGGCTTCCACGTCAGCGGCACCCGCTACAATGCGCCGCTGCCGCTGCATGAATGGTCGCTGATCGAGCTCGGGCCGCT
GCTGACGGATTTCTTTGGCAAGCCGGTCTGGGTGCACAATGGCGGCAAGGCGGGAACGGTCGCCGAATCAATGTTCGGCG
CCGGCCGCTACATAAGGCACTTCGCCTATTTGAGCTTCAACTACGGTTTCGGCGGCGGCCTCGTCAGCAATGGCGAGCTG
CTGCACAACGGCGTCGGCAATGCCGGCGAATTCTCCGGCATATATGATGCCGAGGAGAACAAGCGCCGGCCGGCCCTGCA
GTACCTGATCGAAAATCTCAACCGCAACGGTCTCGACATTCCCTCGATCAGCTACATGCGCAAACATTTCGATCCGAAAT
GGCCGGGCGTTGCCGAATGGGTGGACGAGGTAACGCCCGCCTACAGCCGCCTCATCAACGCCATCTGGGCCATCTTCGAT
CCGCAGGGCATCATTTTCGGCGGCCAGATCCCATCTGCTTTGGCGCAGATGCTCATCGACCGCACCGAAATTTTCGACCG
TCCCCGCTACGGCGTGCCGCGCCCCCGCCCGAAGCTGATCATCTCCGAAATCGCAAGCGATGCCTCGGCCATGGGCGCGG
CGATCGCCCCGTTCAAATCGGCTTATTATTGA

Upstream 100 bases:

>100_bases
AGTCACGGCTGCTGCTATAGGGCGAACGATTGGAACGATCGGTAACGGCGCCAATAATTACTACACGTCTCTAGTAATTA
TCGGCGAAGGAGATGTTGGA

Downstream 100 bases:

>100_bases
GCGTAAGCGGGCCGGCGAGCCAAGCTGTTAGCTCTCTCCGACCTCATCCTGAGGTGCCCCTTAAGGGGCCTCGAAGGATG
AGGGATGATCGGTGCCCCAG

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MAYFPEPLIAPRFLREGGGVVSSNERDMLRLIWRHPGLSRSEVTGHTDLTQQSVYRIIDQLEERGIVSFGSPKPGTGRGQ
PSPTLRLEGRYAYSCGISVNTDVIGICLMDISGKVLAESSIILRERSMAQSLDLVREHLAEHQRANDLSEDAFFGIGFAI
AGFHVSGTRYNAPLPLHEWSLIELGPLLTDFFGKPVWVHNGGKAGTVAESMFGAGRYIRHFAYLSFNYGFGGGLVSNGEL
LHNGVGNAGEFSGIYDAEENKRRPALQYLIENLNRNGLDIPSISYMRKHFDPKWPGVAEWVDEVTPAYSRLINAIWAIFD
PQGIIFGGQIPSALAQMLIDRTEIFDRPRYGVPRPRPKLIISEIASDASAMGAAIAPFKSAYY

Sequences:

>Translated_383_residues
MAYFPEPLIAPRFLREGGGVVSSNERDMLRLIWRHPGLSRSEVTGHTDLTQQSVYRIIDQLEERGIVSFGSPKPGTGRGQ
PSPTLRLEGRYAYSCGISVNTDVIGICLMDISGKVLAESSIILRERSMAQSLDLVREHLAEHQRANDLSEDAFFGIGFAI
AGFHVSGTRYNAPLPLHEWSLIELGPLLTDFFGKPVWVHNGGKAGTVAESMFGAGRYIRHFAYLSFNYGFGGGLVSNGEL
LHNGVGNAGEFSGIYDAEENKRRPALQYLIENLNRNGLDIPSISYMRKHFDPKWPGVAEWVDEVTPAYSRLINAIWAIFD
PQGIIFGGQIPSALAQMLIDRTEIFDRPRYGVPRPRPKLIISEIASDASAMGAAIAPFKSAYY
>Mature_382_residues
AYFPEPLIAPRFLREGGGVVSSNERDMLRLIWRHPGLSRSEVTGHTDLTQQSVYRIIDQLEERGIVSFGSPKPGTGRGQP
SPTLRLEGRYAYSCGISVNTDVIGICLMDISGKVLAESSIILRERSMAQSLDLVREHLAEHQRANDLSEDAFFGIGFAIA
GFHVSGTRYNAPLPLHEWSLIELGPLLTDFFGKPVWVHNGGKAGTVAESMFGAGRYIRHFAYLSFNYGFGGGLVSNGELL
HNGVGNAGEFSGIYDAEENKRRPALQYLIENLNRNGLDIPSISYMRKHFDPKWPGVAEWVDEVTPAYSRLINAIWAIFDP
QGIIFGGQIPSALAQMLIDRTEIFDRPRYGVPRPRPKLIISEIASDASAMGAAIAPFKSAYY

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=337, Percent_Identity=24.3323442136499, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787878, Length=233, Percent_Identity=23.6051502145923, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 42305; Mature: 42173

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYFPEPLIAPRFLREGGGVVSSNERDMLRLIWRHPGLSRSEVTGHTDLTQQSVYRIIDQ
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH
LEERGIVSFGSPKPGTGRGQPSPTLRLEGRYAYSCGISVNTDVIGICLMDISGKVLAESS
HHHCCCEECCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCHHCCH
IILRERSMAQSLDLVREHLAEHQRANDLSEDAFFGIGFAIAGFHVSGTRYNAPLPLHEWS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCEECCCCCCCCCC
LIELGPLLTDFFGKPVWVHNGGKAGTVAESMFGAGRYIRHFAYLSFNYGFGGGLVSNGEL
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHH
LHNGVGNAGEFSGIYDAEENKRRPALQYLIENLNRNGLDIPSISYMRKHFDPKWPGVAEW
HHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHH
VDEVTPAYSRLINAIWAIFDPQGIIFGGQIPSALAQMLIDRTEIFDRPRYGVPRPRPKLI
HHHHCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
ISEIASDASAMGAAIAPFKSAYY
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AYFPEPLIAPRFLREGGGVVSSNERDMLRLIWRHPGLSRSEVTGHTDLTQQSVYRIIDQ
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH
LEERGIVSFGSPKPGTGRGQPSPTLRLEGRYAYSCGISVNTDVIGICLMDISGKVLAESS
HHHCCCEECCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCHHCCH
IILRERSMAQSLDLVREHLAEHQRANDLSEDAFFGIGFAIAGFHVSGTRYNAPLPLHEWS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCEECCCCCCCCCC
LIELGPLLTDFFGKPVWVHNGGKAGTVAESMFGAGRYIRHFAYLSFNYGFGGGLVSNGEL
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHH
LHNGVGNAGEFSGIYDAEENKRRPALQYLIENLNRNGLDIPSISYMRKHFDPKWPGVAEW
HHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHH
VDEVTPAYSRLINAIWAIFDPQGIIFGGQIPSALAQMLIDRTEIFDRPRYGVPRPRPKLI
HHHHCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
ISEIASDASAMGAAIAPFKSAYY
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]