Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209549880
Identifier: 209549880
GI number: 209549880
Start: 2350848
End: 2351849
Strand: Direct
Name: 209549880
Synonym: Rleg2_2296
Alternate gene names: NA
Gene position: 2350848-2351849 (Clockwise)
Preceding gene: 209549876
Following gene: 209549881
Centisome position: 51.8
GC content: 63.77
Gene sequence:
>1002_bases GTGAGCAAGCCGAATTATCGGGACATCGCCCGCCATGCCGGCGTCGGGACGGCCACGGTCGAGCGGGTTCTGAACGGACG CGGGGGCGTTCGGCCGGAGCTGGTCGAGAAGGTGATCATTGCCGCGCGCGCTCTGGATTATCCCCGCACGCTCCCGGACA CCCATCGCGGCCTGCTGCGCATAGAGGTGTTGATGGTGCGTCCTGAAACGACCTTCTATCAGCGGCTCTCCGCAGCATTC GAGAGGATCGCGGCGACCCTTGACCCGCTCGTCATCGTGCATCGCAGCTTTACCGAAGAGATGAAGCCGGAAGAAATTGC GCGCCGCATCTTGTCGGCCGGCCTGCGGCGCGCCGGCCTGATCCTGGCGGTGCCCAACCATCCGGTGATCGGCGCGGCCG TCGAGAAGGTCAGCGCCCAAGGCTTGCCGGTGGTCCACGTCGTCACTCGCGCCTCGGAACGGACAGGCGAATTCGTCGGC ATCGACAATTATGCCGCCGGCCGGACGGCAGCGCTCTTCATCAGCCGAATGGCACGCCGGACGGGTCCCGTCTTTGCGAT CTGCCATCCGATCTATCAGGTGCACCGCGATCGCATCCGCGGTTTTTCGGACTATTTTCTCGAGCACCCCGGTGCCACCA GCTTCCAGTATCTGGGGTTCGGTCTCGACGAAGAGCATCTCGGCGCTGAACTCTTGTCCTCGGCCTTGCGGATGTATCCG GACCTTGCCGGCCTCTACAATGCAGGCGGCGGCAATTCCGCGCTGATCGCTGTGCTGCGGCGGCAGGCGCGCGAGCGCGG CATCTTCTTCGTCGGCCACGAACTCACCGATTATACGCGCAGCGCCTTGCAGGACGGCATCATGGATGTGGTCCTTGACC AGGCCCCCGAGGCGCAGGCCAGGCGATCGCTCGATTTGATCCTGCGCCGGATTGGCTTGACCGATATCAAACCGGACCAG GCACCGATCCGTTTCATTACCATCACCAAGGAAGGGCTTTGA
Upstream 100 bases:
>100_bases CCAATCAGCTTCTGTGAGTTCTGAGGCTCTGGTGTATGAAGAGGGACGGATTGGCCATAGGATCGATCCGACCGCATTCG CCATTCCAGGGACCTGAAAA
Downstream 100 bases:
>100_bases TCTAATCAGATCAAGGAAGGCTTCGGCATTCACCGGCGTCCCTGCTAATTTCCAGTCAGCAGAGAGATGCGGGCGGAGGA GATGCCGATGGATGATCTGA
Product: LacI family transcriptional regulator
Products: NA
Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; LacI Family Regulatory Protein; Regulatory Protein LacI Family; LacI Regulatory Protein; Transcriptional Regulator LacI Family Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulator Protein Laci-Family; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Sugar ABC Transporter Periplasmic Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSKPNYRDIARHAGVGTATVERVLNGRGGVRPELVEKVIIAARALDYPRTLPDTHRGLLRIEVLMVRPETTFYQRLSAAF ERIAATLDPLVIVHRSFTEEMKPEEIARRILSAGLRRAGLILAVPNHPVIGAAVEKVSAQGLPVVHVVTRASERTGEFVG IDNYAAGRTAALFISRMARRTGPVFAICHPIYQVHRDRIRGFSDYFLEHPGATSFQYLGFGLDEEHLGAELLSSALRMYP DLAGLYNAGGGNSALIAVLRRQARERGIFFVGHELTDYTRSALQDGIMDVVLDQAPEAQARRSLDLILRRIGLTDIKPDQ APIRFITITKEGL
Sequences:
>Translated_333_residues MSKPNYRDIARHAGVGTATVERVLNGRGGVRPELVEKVIIAARALDYPRTLPDTHRGLLRIEVLMVRPETTFYQRLSAAF ERIAATLDPLVIVHRSFTEEMKPEEIARRILSAGLRRAGLILAVPNHPVIGAAVEKVSAQGLPVVHVVTRASERTGEFVG IDNYAAGRTAALFISRMARRTGPVFAICHPIYQVHRDRIRGFSDYFLEHPGATSFQYLGFGLDEEHLGAELLSSALRMYP DLAGLYNAGGGNSALIAVLRRQARERGIFFVGHELTDYTRSALQDGIMDVVLDQAPEAQARRSLDLILRRIGLTDIKPDQ APIRFITITKEGL >Mature_332_residues SKPNYRDIARHAGVGTATVERVLNGRGGVRPELVEKVIIAARALDYPRTLPDTHRGLLRIEVLMVRPETTFYQRLSAAFE RIAATLDPLVIVHRSFTEEMKPEEIARRILSAGLRRAGLILAVPNHPVIGAAVEKVSAQGLPVVHVVTRASERTGEFVGI DNYAAGRTAALFISRMARRTGPVFAICHPIYQVHRDRIRGFSDYFLEHPGATSFQYLGFGLDEEHLGAELLSSALRMYPD LAGLYNAGGGNSALIAVLRRQARERGIFFVGHELTDYTRSALQDGIMDVVLDQAPEAQARRSLDLILRRIGLTDIKPDQA PIRFITITKEGL
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36836; Mature: 36705
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPNYRDIARHAGVGTATVERVLNGRGGVRPELVEKVIIAARALDYPRTLPDTHRGLLR CCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEE IEVLMVRPETTFYQRLSAAFERIAATLDPLVIVHRSFTEEMKPEEIARRILSAGLRRAGL EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCE ILAVPNHPVIGAAVEKVSAQGLPVVHVVTRASERTGEFVGIDNYAAGRTAALFISRMARR EEECCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHH TGPVFAICHPIYQVHRDRIRGFSDYFLEHPGATSFQYLGFGLDEEHLGAELLSSALRMYP CCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCC DLAGLYNAGGGNSALIAVLRRQARERGIFFVGHELTDYTRSALQDGIMDVVLDQAPEAQA HHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHH RRSLDLILRRIGLTDIKPDQAPIRFITITKEGL HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure SKPNYRDIARHAGVGTATVERVLNGRGGVRPELVEKVIIAARALDYPRTLPDTHRGLLR CCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEE IEVLMVRPETTFYQRLSAAFERIAATLDPLVIVHRSFTEEMKPEEIARRILSAGLRRAGL EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCE ILAVPNHPVIGAAVEKVSAQGLPVVHVVTRASERTGEFVGIDNYAAGRTAALFISRMARR EEECCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHH TGPVFAICHPIYQVHRDRIRGFSDYFLEHPGATSFQYLGFGLDEEHLGAELLSSALRMYP CCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCC DLAGLYNAGGGNSALIAVLRRQARERGIFFVGHELTDYTRSALQDGIMDVVLDQAPEAQA HHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHH RRSLDLILRRIGLTDIKPDQAPIRFITITKEGL HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA